RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 SLC25A26Q70HW3 274 aa12.93□□□□□ -0.34
TTC39A-208ENST00000413473 ZNF611Q8N823 705 aa12.93□□□□□ -0.34
TTC39A-208ENST00000413473 HSD17B11Q8NBQ5 300 aa12.93□□□□□ -0.34
TTC39A-208ENST00000413473 DMBX1Q8NFW5 382 aa12.93□□□□□ -0.34
TTC39A-208ENST00000413473 ABHD3Q8WU67 409 aa12.93□□□□□ -0.34
TTC39A-208ENST00000413473 ADGRG7Q96K78 797 aa12.93□□□□□ -0.34
TTC39A-208ENST00000413473 CLCC1Q96S66 551 aa12.93□□□□□ -0.34
TTC39A-208ENST00000413473 SH3BGRL3Q9H299 93 aa12.93□□□□□ -0.34
TTC39A-208ENST00000413473 LUZP4Q9P127 313 aa12.93□□□□□ -0.34
TTC39A-208ENST00000413473 RCL1Q9Y2P8 373 aaKnown RBP12.93□□□□□ -0.34
TTC39A-208ENST00000413473 ZNF407Q9C0G0 2248 aa12.93□□□□□ -0.34
TTC39A-208ENST00000413473 MED19A0JLT2 244 aaPredicted RBP12.92□□□□□ -0.34
TTC39A-208ENST00000413473 Q0VFX4 171 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 TRA2AQ13595 282 aaKnown RBP eCLIP12.92□□□□□ -0.34
TTC39A-208ENST00000413473 IL13RA2Q14627 380 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 DAZAP2Q15038 168 aaPredicted RBP12.92□□□□□ -0.34
TTC39A-208ENST00000413473 TMEM211Q6ICI0 200 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 SLC35G3Q8N808 338 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 C14orf79Q96F83 325 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 ZNF845Q96IR2 970 aaPredicted RBP12.92□□□□□ -0.34
TTC39A-208ENST00000413473 RSRP1Q9BUV0 290 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 SCRT1Q9BWW7 348 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 EIF5A2Q9GZV4 153 aaKnown RBP12.92□□□□□ -0.34
TTC39A-208ENST00000413473 RPS10P5Q9NQ39 176 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 FBXO9Q9UK97 447 aaPredicted RBP12.92□□□□□ -0.34
TTC39A-208ENST00000413473 LRRC3CA6NJW4 275 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 F10P00742 488 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 PPYP01298 95 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 PRH1P02810 166 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 GLAP06280 429 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 ASCL1P50553 236 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 RIPPLY2Q5TAB7 128 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 ABLIM2Q6H8Q1 611 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 C5orf24Q7Z6I8 188 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 CCDC71LQ8N9Z2 235 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 CPEB3Q8NE35 698 aaKnown RBP12.92□□□□□ -0.34
TTC39A-208ENST00000413473 MAFAQ8NHW3 353 aaPredicted RBP12.92□□□□□ -0.34
TTC39A-208ENST00000413473 C12orf57Q99622 126 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 TMED3Q9Y3Q3 217 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 CELSR3Q9NYQ7 3312 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 DOCK10Q96BY6 2186 aa12.92□□□□□ -0.34
TTC39A-208ENST00000413473 ZNHIT1O43257 154 aa12.91□□□□□ -0.34
TTC39A-208ENST00000413473 C19orf12Q9NSK7 152 aa12.91□□□□□ -0.34
TTC39A-208ENST00000413473 DEPPQ9NTK1 212 aa12.91□□□□□ -0.34
TTC39A-208ENST00000413473 MPPED1O15442 326 aa12.91□□□□□ -0.34
TTC39A-208ENST00000413473 MMP7P09237 267 aaPredicted RBP12.91□□□□□ -0.34
TTC39A-208ENST00000413473 PPP1R32Q7Z5V6 425 aa12.91□□□□□ -0.34
TTC39A-208ENST00000413473 HPSE2Q8WWQ2 592 aa12.91□□□□□ -0.34
TTC39A-208ENST00000413473 COA4Q9NYJ1 87 aa12.91□□□□□ -0.34
TTC39A-208ENST00000413473 DOCK7Q96N67 2140 aa12.91□□□□□ -0.34
TTC39A-208ENST00000413473 C3orf85A0A1B0GTC6 90 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 SNRNP70P08621 437 aaKnown RBP12.9□□□□□ -0.34
TTC39A-208ENST00000413473 UCP2P55851 309 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 GNMTQ14749 295 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 HMGN3Q15651 99 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 SLC23A3Q6PIS1 610 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 COMMD1Q8N668 190 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 OR4D5Q8NGN0 318 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 SPACA1Q9HBV2 294 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 PARPBPQ9NWS1 579 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 A0A1B0GV50 99 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 NKX2-6A6NCS4 301 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 GNRHRP30968 328 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 HABP2Q14520 560 aaPredicted RBP12.9□□□□□ -0.34
TTC39A-208ENST00000413473 IP6K3Q96PC2 410 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 RNF122Q9H9V4 155 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 SLC7A10Q9NS82 523 aa12.9□□□□□ -0.34
TTC39A-208ENST00000413473 PQLC2LA1A4F0 135 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 C7orf77A4D0Y5 90 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 PINLYPA6NC86 204 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 CCNOP22674 350 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 GDF1P27539 372 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 AWAT1Q58HT5 328 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 ACER2Q5QJU3 275 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 C15orf54Q8N8G6 183 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 SUMF1Q8NBK3 374 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 SFT2D1Q8WV19 159 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 EXTL1Q92935 676 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 USB1Q9BQ65 265 aaKnown RBP12.9□□□□□ -0.35
TTC39A-208ENST00000413473 C20orf24Q9BUV8 137 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 C1QTNF5Q9BXJ0 243 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 PLSCR2Q9NRY7 297 aa12.9□□□□□ -0.35
TTC39A-208ENST00000413473 DNAJC13O75165 2243 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 FAM24AA6NFZ4 105 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 YKT6O15498 198 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 EWSR1Q01844 656 aaKnown RBP eCLIP12.89□□□□□ -0.35
TTC39A-208ENST00000413473 SPIN3Q5JUX0 258 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 C9orf135Q5VTT2 229 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 SPSB4Q96A44 273 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 TECTBQ96PL2 329 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 HS3ST6Q96QI5 342 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 EGLN1Q9GZT9 426 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 UBE2J1Q9Y385 318 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-208ENST00000413473 ZDBF2Q9HCK1 2354 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 CCDC163A0A0D9SF12 145 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 M0R036 132 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 CYTIPO60759 359 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 FOLR2P14207 255 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 DAOP14920 347 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 BCL3P20749 454 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms