RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 FAM27BQ5VT28 67 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 OR2A2Q6IF42 318 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 OR2W3Q7Z3T1 314 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 MDP1Q86V88 176 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 ZDHHC22Q8N966 263 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 ZFP62Q8NB50 900 aaPredicted RBP9.77□□□□□ -0.85
PTPRF-204ENST00000412568 C2orf50Q96LR7 162 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 IMMP1LQ96LU5 166 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 PLEKHA3Q9HB20 300 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 A0A0B4J293 547 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 SSSCA1O60232 199 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 KLF7O75840 302 aaPredicted RBP9.77□□□□□ -0.85
PTPRF-204ENST00000412568 VSIG10L2P0DP72 767 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 RRASP10301 218 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 CPN1P15169 458 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 RPL12P30050 165 aaKnown RBP9.77□□□□□ -0.85
PTPRF-204ENST00000412568 ROM1Q03395 351 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 SPANXN5Q5MJ07 72 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 C17orf82Q86X59 251 aaPredicted RBP9.77□□□□□ -0.85
PTPRF-204ENST00000412568 OR13C8Q8NGS7 320 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 DDA1Q9BW61 102 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 PLEKHF2Q9H8W4 249 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 GAB2Q9UQC2 676 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 ZFP92A6NM28 416 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 UMAD1C9J7I0 102 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 OR2C1O95371 312 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 CST2P09228 141 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 ACP1P24666 158 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 CALCRP30988 508 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 MSMO1Q15800 293 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 C4orf17Q53FE4 359 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 FBXW9Q5XUX1 488 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 SLC25A47Q6Q0C1 308 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 LINC00114Q6XXX2 140 aa9.77□□□□□ -0.85
PTPRF-204ENST00000412568 HEYLQ9NQ87 328 aaPredicted RBP9.77□□□□□ -0.85
PTPRF-204ENST00000412568 PIGBOS1A0A0B4J2F0 54 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 MED19A0JLT2 244 aaPredicted RBP9.76□□□□□ -0.85
PTPRF-204ENST00000412568 ZIC3O60481 467 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 PDCD6O75340 191 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 CST7O76096 145 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 TPPPO94811 219 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 KRASP01116 189 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 NQO2P16083 231 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 SEZ6L2Q6UXD5 910 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 CLEC9AQ6UXN8 241 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 PECRQ9BY49 303 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 LAMA3Q16787 3333 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 TUBAL3A6NHL2 446 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 ZNF724A8MTY0 619 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 GPR137BO60478 399 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 ACTL6AO96019 429 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 GLAP06280 429 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 MPGP29372 298 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 SNCAP37840 140 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 RPS11P62280 158 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPRF-204ENST00000412568 RAB11AP62491 216 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 ZNF816Q0VGE8 651 aaPredicted RBP9.76□□□□□ -0.85
PTPRF-204ENST00000412568 CST9LP1Q5W188 147 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 OR11H4Q8NGC9 324 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 TMEM68Q96MH6 324 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 C19orf12Q9NSK7 152 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 SERTAD4Q9NUC0 356 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 NDRG3Q9UGV2 375 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 TICRRQ7Z2Z1 1910 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 PIEZO2Q9H5I5 2752 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 ADIRFQ15847 76 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 HAGHQ16775 308 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 Q5BKY6 102 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 CCL17Q92583 94 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 CXorf58Q96LI9 332 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 KCNK7Q9Y2U2 307 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 KIAA2026Q5HYC2 2103 aa9.76□□□□□ -0.85
PTPRF-204ENST00000412568 A0A1W2PPV4 95 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 ERVH48-1M5A8F1 160 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 KCNAB3O43448 404 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 BCL2L11O43521 198 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 MPC2O95563 127 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 NGFP01138 241 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 S100A8P05109 93 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 MICBQ29980 383 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 TMEM255AQ5JRV8 349 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 ZNF705AQ6ZN79 300 aaPredicted RBP9.75□□□□□ -0.85
PTPRF-204ENST00000412568 OR2G3Q8NGZ4 309 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 ZNF75AQ96N20 296 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 NOTCH3Q9UM47 2321 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 IGLV3-12A0A075B6K2 115 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 TRBV5-7A0A0A0MS05 114 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 LRRC30A6NM36 301 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 SELEP16581 610 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 ZNF17P17021 662 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 BCL3P20749 454 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 SRPXP78539 464 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 CLEC12BQ2HXU8 276 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 TMEM182Q6ZP80 229 aaPredicted RBP9.75□□□□□ -0.85
PTPRF-204ENST00000412568 NUFIP2Q7Z417 695 aaKnown RBP9.75□□□□□ -0.85
PTPRF-204ENST00000412568 FAM185AQ8N0U4 392 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 TPRX1Q8N7U7 411 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 BPIFCQ8NFQ6 507 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 OR5AP2Q8NGF4 316 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 SLC25A40Q8TBP6 338 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms