RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 GJD3Q8N144 294 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 OR52R1Q8NGF1 315 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 C16orf52Q8NHV5 167 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 VN1R17PQ8TDU5 208 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 MAL2Q969L2 176 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 MBD6Q96DN6 1003 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 S100A16Q96FQ6 103 aaKnown RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 EFCAB11Q9BUY7 163 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 DUSP23Q9BVJ7 150 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 NXF5Q9H1B4 397 aaKnown RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 AK6Q9Y3D8 172 aaKnown RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 TMEM189A5PLL7 270 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 SOX14O95416 240 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 CD27P26842 260 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 TAS2R20P59543 309 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 RAE1P78406 368 aaKnown RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 MEF2BQ02080 365 aaPredicted RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 CDK5R1Q15078 307 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 MPV17LQ2QL34 196 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 COX20Q5RI15 118 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 TMEM69Q5SWH9 247 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 EEF1DP3Q658K8 133 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 SYS1Q8N2H4 156 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 TMEM256Q8N2U0 113 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 ZNF611Q8N823 705 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 ZDHHC22Q8N966 263 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 OR4A5Q8NH83 315 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 KISS1RQ969F8 398 aaPredicted RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 NEIL2Q969S2 332 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 ZC2HC1AQ96GY0 325 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 SGIP1Q9BQI5 828 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 SMIM9A6NGZ8 99 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 LEFTY2O00292 366 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 MPPED1O15442 326 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 P2RX6O15547 441 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 TNFRSF6BO95407 300 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 ZIC2O95409 532 aaPredicted RBP4.55□□□□□ -1.68
HERC4-205ENST00000412272 ERGP11308 486 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 ADRA2CP18825 462 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 TCN2P20062 427 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 CYCSP99999 105 aaKnown RBP4.55□□□□□ -1.68
HERC4-205ENST00000412272 FOXE3Q13461 319 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 DPPA3Q6W0C5 159 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 FOXI2Q6ZQN5 318 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 COMMD6Q7Z4G1 85 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 SLC25A42Q86VD7 318 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 ZIC4Q8N9L1 334 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 GATSQ8NAP1 163 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 C1orf216Q8TAB5 229 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 WDR34Q96EX3 536 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 NDC1Q9BTX1 674 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 NPFFR1Q9GZQ6 430 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 CXCL16Q9H2A7 254 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 H0YIZ8 118 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 RAB27BO00194 218 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 AREGP15514 252 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 EIF2B1Q14232 305 aaKnown RBP4.55□□□□□ -1.68
HERC4-205ENST00000412272 FAM27D1Q5T7N8 215 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 ACSM6Q6P461 480 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 PAQR9Q6ZVX9 377 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 SYT12Q8IV01 421 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 LINC01465Q8N7H1 131 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 CLEC1AQ8NC01 280 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 OR10G4Q8NGN3 311 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 OR6N2Q8NGY6 317 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 OR5B3Q8NH48 314 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 MARCH1Q8TCQ1 289 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 SMIM19Q96E16 107 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 TVP23CQ96ET8 276 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 NRTNQ99748 197 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 TAF9BQ9HBM6 251 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 SGK2Q9HBY8 427 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 CSAG2Q9Y5P2 127 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 NLRC5Q86WI3 1866 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 PET100P0DJ07 73 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 PSG2P11465 335 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 F2RP25116 425 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 FRKP42685 505 aaPredicted RBP4.55□□□□□ -1.68
HERC4-205ENST00000412272 HMGCS2P54868 508 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 ZNF92Q03936 586 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 ZXDCQ2QGD7 858 aaPredicted RBP4.55□□□□□ -1.68
HERC4-205ENST00000412272 ZNF791Q3KP31 576 aaPredicted RBP4.55□□□□□ -1.68
HERC4-205ENST00000412272 TMEM41BQ5BJD5 291 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 WDR74Q6RFH5 385 aaPredicted RBP4.55□□□□□ -1.68
HERC4-205ENST00000412272 TGIF2LYQ8IUE0 185 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 YAF2Q8IY57 180 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 LFNGQ8NES3 379 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 RARRES2Q99969 163 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 PLA2G12AQ9BZM1 189 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 B3GALT5Q9Y2C3 310 aa4.55□□□□□ -1.68
HERC4-205ENST00000412272 COL16A1Q07092 1604 aaPredicted RBP4.55□□□□□ -1.68
HERC4-205ENST00000412272 IGLV3-10A0A075B6K4 115 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 MBLAC1A4D2B0 266 aaPredicted RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 ZNF878C9JN71 531 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 FAM227AF5H4B4 570 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 CLDN34H7C241 214 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 P2RY10O00398 339 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 SAP18O00422 153 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 SLC17A3O00476 420 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms