RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 DYNLRB1Q9NP97 96 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 CHD3Q12873 2000 aaKnown RBP10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A10PA6NDY2 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A18PA6NE21 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A16PA6NEW6 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 NAP1L6A6NFF2 107 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A20PA6NIJ5 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A8PA6NJQ4 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A7PA6NKC0 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A22PA8MWA6 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A12PA8MX19 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A5PA8MXJ8 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A23PA8MXZ1 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 OR2H2O95918 312 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 AMY2AP04746 511 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A15PP0C7V4 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A13PP0C7W8 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A14PP0C7W9 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FAM90A24PP0C7X0 464 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 EGR1P18146 543 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 APOBEC3AP31941 199 aaPredicted RBP10.51□□□□□ -0.73
CHMP3-204ENST00000409727 PMELP40967 661 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 SCGB2B2Q4G0G5 96 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 RNASE10Q5GAN6 216 aaKnown RBP10.51□□□□□ -0.73
CHMP3-204ENST00000409727 ACP7Q6ZNF0 438 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 BEST4Q8NFU0 473 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 OR5T2Q8NGG2 359 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 OR4K15Q8NH41 348 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 OCSTAMPQ9BR26 566 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 RHOFQ9HBH0 211 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 IL19Q9UHD0 177 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 PLEKHA6Q9Y2H5 1048 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 IGHV3OR15-7A0A075B7D8 119 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 TRAV24A0A0B4J272 114 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 FUOMA2VDF0 154 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 C17orf100A8MU93 164 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 MCRIP1C9JLW8 97 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 ZNF205O95201 554 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 PTBP3O95758 552 aaKnown RBP10.5□□□□□ -0.73
CHMP3-204ENST00000409727 CBX5P45973 191 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 IL13RA2Q14627 380 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 MICBQ29980 383 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 ZNF672Q499Z4 452 aaPredicted RBP10.5□□□□□ -0.73
CHMP3-204ENST00000409727 FIP1L1Q6UN15 594 aaKnown RBP10.5□□□□□ -0.73
CHMP3-204ENST00000409727 LINC00596Q86U02 117 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 HOGA1Q86XE5 327 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 TGIF2LYQ8IUE0 185 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 DPCDQ9BVM2 203 aaPredicted RBP10.5□□□□□ -0.73
CHMP3-204ENST00000409727 BEX2Q9BXY8 128 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 BEX1Q9HBH7 125 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 HES4Q9HCC6 221 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 GCM1Q9NP62 436 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 DECR2Q9NUI1 292 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 FLVCR2Q9UPI3 526 aa10.5□□□□□ -0.73
CHMP3-204ENST00000409727 ANKHD1Q8IWZ3 2542 aaKnown RBP10.5□□□□□ -0.73
CHMP3-204ENST00000409727 IGKV1D-8A0A087WSZ0 117 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 INMT-MINDY4F8WBC2 141 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 SH2D1BO14796 132 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 PFDN1O60925 122 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 NOS1APO75052 506 aaPredicted RBP10.49□□□□□ -0.73
CHMP3-204ENST00000409727 HAND1O96004 215 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 CYB5R3P00387 301 aaPredicted RBP10.49□□□□□ -0.73
CHMP3-204ENST00000409727 CD74P04233 296 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 FCGR3AP08637 254 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 RNF224P0DH78 156 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 LOXP28300 417 aaPredicted RBP10.49□□□□□ -0.73
CHMP3-204ENST00000409727 BCAP31P51572 246 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 MST1LQ2TV78 715 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 SMIM21Q3B7S5 101 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 PAN3Q58A45 887 aaKnown RBP10.49□□□□□ -0.73
CHMP3-204ENST00000409727 FAM201AQ5SY85 155 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 Q6P435 159 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 CADM3Q8N126 398 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 MUC15Q8N387 334 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 SLC6A7Q99884 636 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 DHRS9Q9BPW9 319 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 GINS4Q9BRT9 223 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 C20orf85Q9H1P6 137 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 C12orf4Q9NQ89 552 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 RCC2Q9P258 522 aaKnown RBP10.49□□□□□ -0.73
CHMP3-204ENST00000409727 DNAJB11Q9UBS4 358 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 CACNA1DQ01668 2161 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 SPTBN1Q01082 2364 aaKnown RBP10.49□□□□□ -0.73
CHMP3-204ENST00000409727 A0A0B4J293 547 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 RFPL4AA6NLU0 287 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 PRSS44E7EML9 344 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 RFPL4AL1F8VTS6 287 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 SLC33A1O00400 549 aaPredicted RBP10.49□□□□□ -0.73
CHMP3-204ENST00000409727 SDCBPO00560 298 aaPredicted RBP10.49□□□□□ -0.73
CHMP3-204ENST00000409727 CA11O75493 328 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 ACAA1P09110 424 aaPredicted RBP10.49□□□□□ -0.73
CHMP3-204ENST00000409727 ZNF146Q15072 292 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 TATDN3Q17R31 274 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 CHRFAM7AQ494W8 412 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 SPIN3Q5JUX0 258 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 IDO2Q6ZQW0 420 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 GCSAMQ8N6F7 178 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 OR5H2Q8NGV7 314 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 CREB3L1Q96BA8 519 aa10.49□□□□□ -0.73
CHMP3-204ENST00000409727 POM121Q96HA1 1249 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms