RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ONECUT1Q9UBC0 465 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 CUBNO60494 3623 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 A0A1W2PQ09 198 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 RGS9O75916 674 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 OR2H2O95918 312 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 GABRR1P24046 479 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 SSX1Q16384 188 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 C1orf122Q6ZSJ8 110 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 LYPD6Q86Y78 171 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 OR51T1Q8NGJ9 327 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 TBX15Q96SF7 602 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 UQCC2Q9BRT2 126 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 C19orf12Q9NSK7 152 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 ING4Q9UNL4 249 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 PSPNO60542 156 aa16.34■□□□□ 0.21
PDLIM2-207ENST00000409417 ZNF780AO75290 641 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-207ENST00000409417 IGHV4-38-2P0DP08 117 aa16.34■□□□□ 0.21
PDLIM2-207ENST00000409417 LMO1P25800 156 aa16.34■□□□□ 0.21
PDLIM2-207ENST00000409417 GDPD3Q7L5L3 318 aa16.34■□□□□ 0.21
PDLIM2-207ENST00000409417 LRRTM1Q86UE6 522 aa16.34■□□□□ 0.21
PDLIM2-207ENST00000409417 CHST4Q8NCG5 386 aa16.34■□□□□ 0.21
PDLIM2-207ENST00000409417 OR10K1Q8NGX5 313 aa16.34■□□□□ 0.21
PDLIM2-207ENST00000409417 PCDHB16Q9NRJ7 776 aa16.34■□□□□ 0.21
PDLIM2-207ENST00000409417 NDUFB11Q9NX14 153 aa16.34■□□□□ 0.21
PDLIM2-207ENST00000409417 TRAV40A0A0B4J280 105 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 M0R1W7 72 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 DEGS1O15121 323 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 ARL6IP5O75915 188 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 HTR3BO95264 441 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 FPR2P25090 351 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 FABP5Q01469 135 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 PDCD1Q15116 288 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 TMEM200BQ69YZ2 307 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 Q6P435 159 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 FAM185AQ8N0U4 392 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 OR4M1Q8NGD0 313 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 PPP1R35Q8TAP8 253 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 MUL1Q969V5 352 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 OCEL1Q9H607 264 aa16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 MRPS28Q9Y2Q9 187 aaKnown RBP16.33■□□□□ 0.2
PDLIM2-207ENST00000409417 SIRPB1O00241 398 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 CSTBP04080 98 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 ZNF44P15621 663 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 SCN1BQ07699 218 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 GPR176Q14439 515 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 IL13RA2Q14627 380 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 GRK1Q15835 563 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 SLC22A6Q4U2R8 563 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 NHLRC3Q5JS37 347 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 GPR157Q5UAW9 335 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 Q8N7P7 452 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 FOXRED1Q96CU9 486 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 NR1H4Q96RI1 486 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 CHST6Q9GZX3 395 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 SLITRK2Q9H156 845 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 METTL8Q9H825 291 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 ZNF69Q9UC07 566 aa16.32■□□□□ 0.2
PDLIM2-207ENST00000409417 IGHV3OR16-10A0A075B7F0 116 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 A0A0G2JK05 382 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 A0A1W2PPH5 198 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 CCRL2O00421 344 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 MGST3O14880 152 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 PSMB9P28065 219 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 OR3A1P47881 315 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 EDDM3BP56851 147 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 BPIFB3P59826 476 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 BLMHQ13867 455 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 PIGYQ3MUY2 71 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 GLT8D1Q68CQ7 371 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 AWAT2Q6E213 333 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 CD200R1LQ6Q8B3 271 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 GLIPR1L1Q6UWM5 242 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 VMO1Q7Z5L0 202 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 OSR2Q8N2R0 312 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 BPIFB2Q8N4F0 458 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 OR4S1Q8NGB4 309 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 OR4D6Q8NGJ1 314 aa16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 UNKLQ9H9P5 680 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-207ENST00000409417 COL6A5A8TX70 2615 aa16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 CENPVL3A0A0U1RRI6 287 aa16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 SLC33A1O00400 549 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 CD37P11049 281 aa16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 GTF2F2P13984 249 aa16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 SERPINA2P20848 420 aa16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 ERP29P30040 261 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 MEF2CQ06413 473 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 EDDM3AQ14507 147 aa16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 C9orf139Q6ZV77 190 aa16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 C22orf15Q8WYQ4 148 aa16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 MS4A7Q9GZW8 240 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 ST3GAL6Q9Y274 331 aa16.3■□□□□ 0.2
PDLIM2-207ENST00000409417 TNFAIP8O95379 198 aa16.29■□□□□ 0.2
PDLIM2-207ENST00000409417 GALP22466 123 aa16.29■□□□□ 0.2
PDLIM2-207ENST00000409417 PRTN3P24158 256 aa16.29■□□□□ 0.2
PDLIM2-207ENST00000409417 CALRP27797 417 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-207ENST00000409417 RBM11P57052 281 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-207ENST00000409417 TUSC1Q2TAM9 212 aa16.29■□□□□ 0.2
PDLIM2-207ENST00000409417 C1orf100Q5SVJ3 147 aa16.29■□□□□ 0.2
PDLIM2-207ENST00000409417 METAP1DQ6UB28 335 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-207ENST00000409417 USP43Q70EL4 1123 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms