RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 LRP5LA4QPB2 252 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 EEF1E1-BLOC1S5C9J1V9 151 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 DUSP1P28562 367 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 SERPINF1P36955 418 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 PSG7Q13046 419 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 ZNF546Q86UE3 836 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 MARS2Q96GW9 593 aaKnown RBP21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 ADAT1Q9BUB4 502 aaKnown RBP21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 SCNM1Q9BWG6 230 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 MFFQ9GZY8 342 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 SPACA1Q9HBV2 294 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 DECR2Q9NUI1 292 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 FAM215AQ9Y5M1 114 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 ZFHX4Q86UP3 3567 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 GLP1RP43220 463 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 ALKBH6Q3KRA9 238 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 KLF14Q8TD94 323 aaPredicted RBP21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 ARL6Q9H0F7 186 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 WDR13Q9H1Z4 485 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 RHOFQ9HBH0 211 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 AMDHD2Q9Y303 409 aa21.05■□□□□ 0.96
DNMT3A-206ENST00000406659 CECR9P0C854 216 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 ZNF728P0DKX0 622 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 RPA2P15927 270 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 MPV17P39210 176 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 EXOSC2Q13868 293 aaKnown RBP21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 IL13RA2Q14627 380 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 IGFBP7Q16270 282 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 ANKRD55Q3KP44 614 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 LRRC37A5PQ49AS3 106 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 OR8H3Q8N146 312 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 PPP1R1CQ8WVI7 109 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 ABHD17AQ96GS6 310 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 LIME1Q9H400 295 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 RAB18Q9NP72 206 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 UBQLN2Q9UHD9 624 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 SSUH2Q9Y2M2 353 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 FRYQ5TBA9 3013 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 SVILO95425 2214 aa21.04■□□□□ 0.96
DNMT3A-206ENST00000406659 OR5H1A6NKK0 313 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 RHBDL1O75783 438 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 IFNA2P01563 188 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 SLC25A4P12235 298 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 RPS2P15880 293 aaKnown RBP21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 TUBG1P23258 451 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 FCGR2CP31995 323 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 CYCSP99999 105 aaKnown RBP21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 OR8G1Q15617 311 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 C11orf87Q6NUJ2 197 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 TMEM65Q6PI78 240 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 SGPP2Q8IWX5 399 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 SPACA3Q8IXA5 215 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 TOMM40LQ969M1 308 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 TUBG2Q9NRH3 451 aa21.03■□□□□ 0.96
DNMT3A-206ENST00000406659 HSPB6O14558 160 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 IGLV1-44P01699 117 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 SRSF7Q16629 238 aaKnown RBP eCLIP21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 FAM76BQ5HYJ3 339 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 Q6ZPA2 131 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 SCCPDHQ8NBX0 429 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 PRR13Q9NZ81 148 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 POLDIP2Q9Y2S7 368 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 MAB21L2Q9Y586 359 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 INTS1Q8N201 2190 aaKnown RBP21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 ASPMQ8IZT6 3477 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 TEX13DA0A0J9YY54 714 aaPredicted RBP21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 ZNF205O95201 554 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 TIMP3P35625 211 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 FXYD4P59646 89 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 C3P1Q6ZMU1 363 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 Q6ZS49 121 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 WDR86Q86TI4 376 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 SUMF2Q8NBJ7 301 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 FAM57AQ8TBR7 257 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 METTL8Q9H825 291 aaKnown RBP21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 Q9N2K0 584 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 TMEM100Q9NV29 134 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 RDH8Q9NYR8 311 aa21.02■□□□□ 0.96
DNMT3A-206ENST00000406659 RP2O75695 350 aa21.01■□□□□ 0.95
DNMT3A-206ENST00000406659 NAPSAO96009 420 aa21.01■□□□□ 0.95
DNMT3A-206ENST00000406659 CFDP00746 253 aaPredicted RBP21.01■□□□□ 0.95
DNMT3A-206ENST00000406659 RBMXP38159 391 aaKnown RBP21.01■□□□□ 0.95
DNMT3A-206ENST00000406659 ABCA11PQ4W5N1 156 aa21.01■□□□□ 0.95
DNMT3A-206ENST00000406659 Q8IYB0 196 aa21.01■□□□□ 0.95
DNMT3A-206ENST00000406659 RPRMLQ8N4K4 120 aa21.01■□□□□ 0.95
DNMT3A-206ENST00000406659 THAP6Q8TBB0 222 aa21.01■□□□□ 0.95
DNMT3A-206ENST00000406659 BCL2L14Q9BZR8 327 aa21.01■□□□□ 0.95
DNMT3A-206ENST00000406659 NMES1Q9C002 83 aa21.01■□□□□ 0.95
DNMT3A-206ENST00000406659 PURGQ9UJV8 347 aaKnown RBP21.01■□□□□ 0.95
DNMT3A-206ENST00000406659 TP53TG5Q9Y2B4 290 aa21.01■□□□□ 0.95
DNMT3A-206ENST00000406659 AP2S1P53680 142 aaPredicted RBP21■□□□□ 0.95
DNMT3A-206ENST00000406659 HERV-K104P61576 105 aa21■□□□□ 0.95
DNMT3A-206ENST00000406659 FAM169BQ8N8A8 192 aa21■□□□□ 0.95
DNMT3A-206ENST00000406659 RIMS4Q9H426 269 aaPredicted RBP21■□□□□ 0.95
DNMT3A-206ENST00000406659 WASF3Q9UPY6 502 aa21■□□□□ 0.95
DNMT3A-206ENST00000406659 SLC25A15Q9Y619 301 aa21■□□□□ 0.95
DNMT3A-206ENST00000406659 ESPL1Q14674 2120 aa21■□□□□ 0.95
DNMT3A-206ENST00000406659 CFAP47Q6ZTR5 3102 aa21■□□□□ 0.95
DNMT3A-206ENST00000406659 IGHV2OR16-5A0A0B4J2B6 119 aa21■□□□□ 0.95
DNMT3A-206ENST00000406659 IGHV1-18A0A0C4DH31 117 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms