RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 SRSF4Q08170 494 aaKnown RBP6.5□□□□□ -1.37
HDAC9-202ENST00000405010 CSRP2Q16527 193 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 FAM78BQ5VT40 261 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 WDR25Q64LD2 544 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-202ENST00000405010 ETFRF1Q6IPR1 90 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 ANKRD33Q7Z3H0 272 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 GTF3AQ92664 365 aaKnown RBP6.5□□□□□ -1.37
HDAC9-202ENST00000405010 SPSB1Q96BD6 273 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 C14orf144Q96I85 54 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 UHRF2Q96PU4 802 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 ATP5SQ99766 215 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 TMEM74BQ9NUR3 256 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 DCAF16Q9NXF7 216 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 PISDQ9UG56 409 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 PIAS3Q9Y6X2 628 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 ANKUB1A6NFN9 424 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 C9JQL5 133 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 MPPED1O15442 326 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 WDR1O75083 606 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 TUSC2O75896 110 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 SMIM10L1P0DMW3 83 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 BCL2P10415 239 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 COX5AP20674 150 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 NTF3P20783 257 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 HNF1AP20823 631 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 FUT3P21217 361 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 EGR4Q05215 589 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 MYBPHQ13203 477 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 VAMP3Q15836 100 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 MST1LQ2TV78 715 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 LINC00114Q6XXX2 140 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 LHFPL2Q6ZUX7 228 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 ZNF439Q8NDP4 499 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 OR10J5Q8NHC4 309 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 SMIM10Q96HG1 83 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 OXGR1Q96P68 337 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 RBM14Q96PK6 669 aaKnown RBP6.5□□□□□ -1.37
HDAC9-202ENST00000405010 RAB40CQ96S21 281 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 TBX15Q96SF7 602 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 ZNF665Q9H7R5 613 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 G6PC2Q9NQR9 355 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 MYOTQ9UBF9 498 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 STARD10Q9Y365 291 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 PAM16Q9Y3D7 125 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 CLEC18AA5D8T8 446 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 CRYM-AS1A6NIL9 109 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 HSBP1L1C9JCN9 74 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 DVL1O14640 695 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 PITX3O75364 302 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 VDAC1P21796 283 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 MSX1P28360 303 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 OR10J1P30954 320 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 HNRNPA3P51991 378 aaKnown RBP6.5□□□□□ -1.37
HDAC9-202ENST00000405010 RAB31Q13636 194 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 GFI1BQ5VTD9 330 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 MAML2Q8IZL2 1156 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-202ENST00000405010 FAM58AQ8N1B3 248 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 CLEC18CQ8NCF0 446 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 PHOSPHO2Q8TCD6 241 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 SLC25A43Q8WUT9 341 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-202ENST00000405010 LRRC3BQ96PB8 259 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 NDUFAF3Q9BU61 184 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 SLC25A22Q9H936 323 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 TRAPPC2LQ9UL33 140 aa6.5□□□□□ -1.37
HDAC9-202ENST00000405010 TNS1Q9HBL0 1735 aaKnown RBP6.5□□□□□ -1.37
HDAC9-202ENST00000405010 TRAV34A0A0B4J273 112 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 DUXBA0A1W2PPF3 345 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 TCF21O43680 179 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 DXOO77932 396 aaKnown RBP6.49□□□□□ -1.37
HDAC9-202ENST00000405010 GFERP55789 205 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 UBE2G2P60604 165 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 FOXK1P85037 733 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 ZNF658BQ4V348 819 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-202ENST00000405010 MRGPRGQ86SM5 289 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 OR11L1Q8NGX0 322 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 CMTM2Q8TAZ6 248 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 DTD1Q8TEA8 209 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 EXTL1Q92935 676 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 TMEM230Q96A57 120 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 C8orf44Q96CB5 159 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 GINS3Q9BRX5 216 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 RTBDNQ9BSG5 229 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-202ENST00000405010 ELOVL1Q9BW60 279 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 CALHM2Q9HA72 323 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 WBP1LQ9NX94 342 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 C9J4A7 227 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 F6UZH7 168 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 H3BMH7 237 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 TNFRSF4P43489 277 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 CARD18P57730 90 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 PCBD1P61457 104 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 TMEM196Q5HYL7 178 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 PLAC9Q5JTB6 97 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 LANCL3Q6ZV70 420 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 C16orf82Q7Z2V1 217 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 TMEM183AQ8IXX5 376 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 OR2AE1Q8NHA4 323 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-202ENST00000405010 OIT3Q8WWZ8 545 aa6.49□□□□□ -1.37
HDAC9-202ENST00000405010 RDH5Q92781 318 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms