RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 RAB38P57729 211 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 CD164Q04900 197 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 ZNHIT3Q15649 155 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 IDNKQ5T6J7 187 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 SGPP2Q8IWX5 399 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 CYP4Z2PQ8N1L4 340 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 SPICQ8N5J4 248 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR4K17Q8NGC6 315 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR2K2Q8NGT1 345 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR5AK3PQ8NH89 298 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR2AE1Q8NHA4 323 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 RNASEH2CQ8TDP1 164 aaKnown RBP2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 PHF10Q8WUB8 498 aaKnown RBP2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 RBPMSQ93062 196 aaKnown RBP2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 ZMYND19Q96E35 227 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 QKIQ96PU8 341 aaKnown RBP eCLIP2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR2M4Q96R27 311 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 DCUN1D5Q9BTE7 237 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 DRC3Q9H069 523 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 METTL8Q9H825 291 aaKnown RBP2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 ABCB9Q9NP78 766 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 ASCL3Q9NQ33 180 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 RBM12B-AS1Q9P1G2 102 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 USH1CQ9Y6N9 552 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 SETD1AO15047 1707 aaKnown RBP2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 GPR179Q6PRD1 2367 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 A0A1B0GX12 115 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 RBFOX3A6NFN3 312 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR2A4O95047 310 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 NRASP01111 189 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 HRASP01112 189 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 KRASP01116 189 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 S100A6P06703 90 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 TAC1P20366 129 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 GTF2H1P32780 548 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 ERFP50548 548 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 UBE2IP63279 158 aaKnown RBP2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 ATP5G2Q06055 141 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 TMEM241Q24JQ0 296 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 TMEM249Q2WGJ8 235 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR10J3Q5JRS4 329 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 KCTD16Q68DU8 428 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 PTRHD1Q6GMV3 140 aaKnown RBP2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 MORN3Q6PF18 240 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 FUNDC1Q8IVP5 155 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR1P1Q8NH06 330 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR52N1Q8NH53 320 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 UBA3Q8TBC4 463 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 ORAOV1Q8WV07 137 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 ITLN2Q8WWU7 325 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 NELFBQ8WX92 580 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 FMC1Q96HJ9 113 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 RILPQ96NA2 401 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR2A7Q96R45 310 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 NXF2Q9GZY0 626 aaKnown RBP2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 WDR54Q9H977 334 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 IMP3Q9NV31 184 aaKnown RBP2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 TMEM38BQ9NVV0 291 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 DNAJC27Q9NZQ0 273 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 INSIG2Q9Y5U4 225 aa2.09□□□□□ -2.07
HMGB1P17-201ENST00000403495 MYO3BQ8WXR4 1341 aa2.09□□□□□ -2.08
HMGB1P17-201ENST00000403495 KIAA0232Q92628 1395 aa2.09□□□□□ -2.08
HMGB1P17-201ENST00000403495 NPHP4O75161 1426 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 NOTCH2Q04721 2471 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 A0A0A6YYH2 397 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 LOC389332A0A1B0GUA5 103 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 GOLGA6L10A6NI86 522 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 A6NJ64 397 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 LIN7AO14910 233 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 UBDO15205 165 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 TOX3O15405 576 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 FABP7O15540 132 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 CRTAPO75718 401 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 KLHL2O95198 593 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 RAB36O95755 333 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 CXorf1O96002 111 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 CDK1P06493 297 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 LIMS3P0CW19 117 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 LIMS4P0CW20 117 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 EMP2P54851 167 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 OR10A3P58181 314 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 ELOCQ15369 112 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 CEACAM16Q2WEN9 425 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 PRR9Q5T870 116 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 UGT2A3Q6UWM9 527 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 CASP12Q6UXS9 341 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 C16orf47Q6ZP98 133 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 TMEM136Q6ZRR5 245 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 USP50Q70EL3 339 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 ZDHHC22Q8N966 263 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 APCDD1LQ8NCL9 501 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 KLF14Q8TD94 323 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 BLNKQ8WV28 456 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 ZNF436Q9C0F3 470 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 POMKQ9H5K3 350 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 RDH14Q9HBH5 336 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 DIABLOQ9NR28 239 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 FBXL3Q9UKT7 428 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 RAD50Q92878 1312 aa2.08□□□□□ -2.08
HMGB1P17-201ENST00000403495 COL1A2P08123 1366 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms