RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CTSDP07339 412 aaPredicted RBP16■□□□□ 0.15
COL18A1-204ENST00000400337 BCL3P20749 454 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 MPGP29372 298 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 OPRK1P41145 380 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 TMEM211Q6ICI0 200 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 RPS4Y2Q8TD47 263 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 ZDHHC16Q969W1 377 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 RBP4P02753 201 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 CNN1P51911 297 aaKnown RBP16■□□□□ 0.15
COL18A1-204ENST00000400337 UQCC3Q6UW78 93 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 MAP6Q96JE9 813 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 IL36GQ9NZH8 169 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 LSM2Q9Y333 95 aaKnown RBP16■□□□□ 0.15
COL18A1-204ENST00000400337 CPN1P15169 458 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 COL19A1Q14993 1142 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 FBXL17Q9UF56 701 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 ZMIZ1Q9ULJ6 1067 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 MMP16P51512 607 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 BTNL3Q6UXE8 466 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 CLEC18BQ6UXF7 455 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 ZNF429Q86V71 674 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 MISP3Q96FF7 219 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 GPR137Q96N19 417 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 STARD10Q9Y365 291 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 LRRC37AA6NMS7 1700 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 MRPS18AQ9NVS2 196 aaKnown RBP15.99■□□□□ 0.15
COL18A1-204ENST00000400337 ZNF205O95201 554 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 OPN1MWP04001 364 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 OPN1MW2P0DN77 364 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 OPN1MW3P0DN78 364 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 ZP3P21754 424 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 IL13RA2Q14627 380 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 PLPPR5Q32ZL2 321 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 TREM2Q9NZC2 230 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 OR6C3Q9NZP0 311 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 KLHDC2Q9Y2U9 406 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 AMDHD2Q9Y303 409 aa15.99■□□□□ 0.15
COL18A1-204ENST00000400337 UNC13CQ8NB66 2214 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 TRDCB7Z8K6 153 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 POLR2GP62487 172 aaKnown RBP eCLIP15.98■□□□□ 0.151e-6■■□□□ 13.6
COL18A1-204ENST00000400337 PJVKQ0ZLH3 352 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 COMMD1Q8N668 190 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 OR6S1Q8NH40 331 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 MMP26Q9NRE1 261 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 CELA2AP08217 269 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 MGAT2Q10469 447 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 OR5I1Q13606 314 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 ETV3LQ6ZN32 361 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 TBC1D26Q86UD7 250 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 ADAT3Q96EY9 351 aaPredicted RBP15.98■□□□□ 0.15
COL18A1-204ENST00000400337 ST6GAL2Q96JF0 529 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 LURAP1Q96LR2 239 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 DHRS9Q9BPW9 319 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 ST6GALNAC2Q9UJ37 374 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 COL11A1P12107 1806 aaPredicted RBP15.98■□□□□ 0.15
COL18A1-204ENST00000400337 VSIG8P0DPA2 414 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 FAHD2BQ6P2I3 314 aaPredicted RBP15.98■□□□□ 0.15
COL18A1-204ENST00000400337 FAHD2AQ96GK7 314 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 FGF2P09038 288 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 NANOS3P60323 173 aaKnown RBP15.98■□□□□ 0.15
COL18A1-204ENST00000400337 FUT5Q11128 374 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 FOXO1Q12778 655 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 SIGLECL1Q8N7X8 197 aa15.98■□□□□ 0.15
COL18A1-204ENST00000400337 SIRT4Q9Y6E7 314 aaPredicted RBP15.98■□□□□ 0.15
COL18A1-204ENST00000400337 XKRY2A2RUG3 117 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 CXCL3P19876 107 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 CLRN3Q8NCR9 226 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 WSB1Q9Y6I7 421 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 TOX4O94842 621 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 IL11P20809 199 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 ERVFC1-1P60608 527 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 DBX1A6NMT0 343 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 PRSS44E7EML9 344 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 PLA2G10O15496 165 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 CSF2RBP32927 897 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 APC2O95996 2303 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 GCM2O75603 506 aaPredicted RBP15.97■□□□□ 0.15
COL18A1-204ENST00000400337 ASAH2BP0C7U1 165 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 SLC25A45Q8N413 288 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 RFLNBQ8N5W9 214 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 A0A0J9YW62 118 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 TMPRSS2O15393 492 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 SP1P08047 785 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 EFNB2P52799 333 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 TMEM33P57088 247 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 SURF2Q15527 256 aaPredicted RBP15.97■□□□□ 0.15
COL18A1-204ENST00000400337 PIGYQ3MUY2 71 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 ZDHHC11Q9H8X9 412 aa15.97■□□□□ 0.15
COL18A1-204ENST00000400337 TNS1Q9HBL0 1735 aaKnown RBP15.96■□□□□ 0.15
COL18A1-204ENST00000400337 HMSDA8MTL9 139 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 HAND1O96004 215 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 SEZ6L2Q6UXD5 910 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 ZNF586Q9NXT0 402 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 NTMQ9P121 344 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 NRXN2Q9P2S2 1712 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 MAP1LC3B2A6NCE7 125 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 CD3EP07766 207 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 FBP1P09467 338 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 INHBBP09529 407 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 ZNF79Q15937 498 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms