RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PRSS53Q2L4Q9 553 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 H1FNTQ75WM6 255 aaPredicted RBP7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 CLDN19Q8N6F1 224 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 TFAP2BQ92481 460 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 UBE2FQ969M7 185 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 ISCA1Q9BUE6 129 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 NAV1Q8NEY1 1877 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 SPINT1O43278 529 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 PROCRQ9UNN8 238 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 CSPG4Q6UVK1 2322 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 F2RL2O00254 374 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 PVRP15151 417 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 RGMBQ6NW40 437 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 ZNF600Q6ZNG1 722 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 TNFRSF14Q92956 283 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 ATRNO75882 1429 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 FECHP22830 423 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 HOXD13P35453 343 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 PIGTQ969N2 578 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 RAX2Q96IS3 184 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 ZNF430Q9H8G1 570 aaPredicted RBP7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 DOCK4Q8N1I0 1966 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 TMEM189A5PLL7 270 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 TMEM189-UBE2V1I3L0A0 370 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 CD5LO43866 347 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 FPR2P25090 351 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 ASCL5Q7RTU5 278 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 C1orf43Q9BWL3 253 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 AMY1AP04745 511 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 PPP1R1AQ13522 171 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 ASPHD2Q6ICH7 369 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 OR2C3Q8N628 320 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 A0A1W2PRU2 124 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 SOWAHAQ2M3V2 549 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 C10orf113Q5VZT2 155 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 ANKRD36CQ5JPF3 1778 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 ROS1P08922 2347 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 UBE2Q2LH0YL09 131 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 SRSF10O75494 262 aaKnown RBP7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 DXOO77932 396 aaKnown RBP7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 PRSS56P0CW18 603 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 NUTF2P61970 127 aaKnown RBP7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 C2orf83Q53S99 150 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 DNM1P46Q6ZS02 220 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 USP50Q70EL3 339 aaPredicted RBP7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 OR10S1Q8NGN2 331 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 ROBO4Q8WZ75 1007 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 OTOGLQ3ZCN5 2332 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 NXPH1P58417 271 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 SLC16A13Q7RTY0 426 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 ZMAT3Q9HA38 289 aaKnown RBP7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 HMSDA8MTL9 139 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 SDC1P18827 310 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 HBBP68871 147 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 DUSP28Q4G0W2 176 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 RNF165Q6ZSG1 346 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 CMTM8Q8IZV2 173 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 HMGCLL1Q8TB92 370 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 OR51M1Q9H341 326 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 SDCBPO00560 298 aaPredicted RBP7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 AWAT1Q58HT5 328 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 PMS2CLQ68D20 193 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 MAP3K4Q9Y6R4 1608 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 FAM209BQ5JX69 171 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 DTX2Q86UW9 622 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 FBXL14Q8N1E6 418 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 TTC9CQ8N5M4 171 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 CSF3RQ99062 836 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 K7N7A8 449 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 RRHO14718 337 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 FGF18O76093 207 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 EFNB2P52799 333 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 CLDN12P56749 244 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 FBXL22Q6P050 247 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 OR4D5Q8NGN0 318 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 NUBPLQ8TB37 319 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 OR51E1Q8TCB6 317 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 FLYWCH2Q96CP2 140 aaKnown RBP7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 TNFRSF13CQ96RJ3 184 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 DOPEY1Q5JWR5 2465 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 SLC17A2O00624 439 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 RPS24P62847 133 aaKnown RBP7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 SPNS2Q8IVW8 549 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 PP6455Q8WZ26 134 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 C5orf30Q96GV9 206 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 RSRP1Q9BUV0 290 aa7.7□□□□□ -1.18
CACNA1C-220ENST00000399655 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 SSBP2P81877 361 aaPredicted RBP7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 LAMTOR1Q6IAA8 161 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 PRRX2Q99811 253 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 SFXN1Q9H9B4 322 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 HS3ST3A1Q9Y663 406 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 ABHD3Q8WU67 409 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 ZNF385DQ9H6B1 395 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 NTMQ9P121 344 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 ST3GAL6Q9Y274 331 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 LRRC7Q96NW7 1537 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 LOC107986453A0A1B0GWG9 222 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 SLCO4C1Q6ZQN7 724 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms