RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 ASCL3Q9NQ33 180 aa8.21□□□□□ -1.1
COL28A1-201ENST00000399429 PIGBOS1A0A0B4J2F0 54 aa8.21□□□□□ -1.1
COL28A1-201ENST00000399429 RER1O15258 196 aa8.21□□□□□ -1.1
COL28A1-201ENST00000399429 HOXB2P14652 356 aa8.21□□□□□ -1.1
COL28A1-201ENST00000399429 MAJINQ3KP22 176 aa8.21□□□□□ -1.1
COL28A1-201ENST00000399429 TMPRSS7Q7RTY8 843 aa8.21□□□□□ -1.1
COL28A1-201ENST00000399429 OR11L1Q8NGX0 322 aa8.21□□□□□ -1.1
COL28A1-201ENST00000399429 NINJ1Q92982 152 aa8.21□□□□□ -1.1
COL28A1-201ENST00000399429 ACY3Q96HD9 319 aa8.21□□□□□ -1.1
COL28A1-201ENST00000399429 SNHG12Q9BXW3 62 aa8.21□□□□□ -1.1
COL28A1-201ENST00000399429 RIMS4Q9H426 269 aaPredicted RBP8.21□□□□□ -1.1
COL28A1-201ENST00000399429 CLCF1Q9UBD9 225 aa8.21□□□□□ -1.1
COL28A1-201ENST00000399429 FOXD3Q9UJU5 478 aaPredicted RBP8.21□□□□□ -1.1
COL28A1-201ENST00000399429 HEATR5BQ9P2D3 2071 aa8.21□□□□□ -1.1
COL28A1-201ENST00000399429 DIRC3C9JPN6 131 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 MELTFP08582 738 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 P2RY6Q15077 328 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 TMEM52BQ4KMG9 183 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 TMEM252Q8N6L7 170 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 ADPRHL1Q8NDY3 354 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 OIT3Q8WWZ8 545 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 PTX4Q96A99 478 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 OR2J1Q9GZK6 312 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 SRD5A3Q9H8P0 318 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 NAT8BQ9UHF3 227 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 DOCK8Q8NF50 2099 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 A0A0G2JMZ2 1700 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 LRRC37A2A6NM11 1700 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 LRRC37AA6NMS7 1700 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 QSER1Q2KHR3 1735 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 TP53I11O14683 189 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 TUSC2O75896 110 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 TMEM52Q8NDY8 209 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 PTPMT1Q8WUK0 201 aaPredicted RBP8.2□□□□□ -1.1
COL28A1-201ENST00000399429 ACTR3CQ9C0K3 210 aaPredicted RBP8.2□□□□□ -1.1
COL28A1-201ENST00000399429 ST3GAL6Q9Y274 331 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 MGAMO43451 1857 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 MYOFQ9NZM1 2061 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 DOCK6Q96HP0 2047 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 ZNF814B7Z6K7 855 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 RAB29O14966 203 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 HSBP1O75506 76 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 PMELP40967 661 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 CLDN17P56750 224 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 PRR27Q6MZM9 219 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 BEND2Q8NDZ0 799 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 P4HTMQ9NXG6 502 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 COL5A3P25940 1745 aaPredicted RBP8.2□□□□□ -1.1
COL28A1-201ENST00000399429 H0Y8X5 98 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 IGKV1D-16P01601 117 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 TMEM11P17152 192 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 CEBPEQ15744 281 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 MSMO1Q15800 293 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 ARTNQ5T4W7 220 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 ERASQ7Z444 233 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 ST6GALNAC3Q8NDV1 305 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 MRPL30Q8TCC3 161 aaKnown RBP8.2□□□□□ -1.1
COL28A1-201ENST00000399429 GNRHR2Q96P88 292 aa8.2□□□□□ -1.1
COL28A1-201ENST00000399429 TCRBV21S2A2A0A5A6 115 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 WDR1O75083 606 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 CEBPBP17676 345 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 UNC119Q13432 240 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 RTP5Q14D33 572 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 ATP6V1FQ16864 119 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 C1orf100Q5SVJ3 147 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 RAET1LQ5VY80 246 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 VHLLQ6RSH7 139 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 SPRED2Q7Z698 418 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 MRGPRGQ86SM5 289 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 FBXL14Q8N1E6 418 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 OR5L2Q8NGL0 311 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 OR2A5Q96R48 311 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 PDCD11Q14690 1871 aaKnown RBP8.19□□□□□ -1.1
COL28A1-201ENST00000399429 A0A087WWC5 75 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 CEACAM1P13688 526 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 PNLIPP16233 465 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 CCR2P41597 374 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 ZNF117Q03924 483 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 CXorf66Q5JRM2 361 aaPredicted RBP8.19□□□□□ -1.1
COL28A1-201ENST00000399429 ATG4DQ86TL0 474 aaPredicted RBP8.19□□□□□ -1.1
COL28A1-201ENST00000399429 TSTD1Q8NFU3 115 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 SGMS2Q8NHU3 365 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 ADGRG7Q96K78 797 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 GPHA2Q96T91 129 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 RFNGQ9Y644 331 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 GREB1Q4ZG55 1949 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 H3BMH7 237 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 HRASP01112 189 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 GNRH1P01148 92 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 COX5AP20674 150 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 INSM1Q01101 510 aaPredicted RBP8.19□□□□□ -1.1
COL28A1-201ENST00000399429 PINX1Q96BK5 328 aaKnown RBP8.19□□□□□ -1.1
COL28A1-201ENST00000399429 RTBDNQ9BSG5 229 aaPredicted RBP8.19□□□□□ -1.1
COL28A1-201ENST00000399429 SLC35D1Q9NTN3 355 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 SEMA5BQ9P283 1151 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 PPP1R3CQ9UQK1 317 aa8.19□□□□□ -1.1
COL28A1-201ENST00000399429 ANKRD36A6QL64 1941 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 CLEC18AA5D8T8 446 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 C17orf112F2Z3M2 114 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 K7ERU9 68 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms