RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 IGLV3-16A0A075B6K0 115 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 ONECUT2O95948 504 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 NTSR1P30989 418 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 HOXA6P31267 233 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 GUCA2AQ02747 115 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 HHEXQ03014 270 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 BHLHA15Q7RTS1 189 aaPredicted RBP8.56□□□□□ -1.04
SMAD9-203ENST00000399275 MRGPRGQ86SM5 289 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 RTN4RL2Q86UN3 420 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 OR2T6Q8NHC8 308 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 Q96M85 177 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 SSBP4Q9BWG4 385 aaPredicted RBP8.56□□□□□ -1.04
SMAD9-203ENST00000399275 NAA60Q9H7X0 242 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 CALHM2Q9HA72 323 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 G6PC2Q9NQR9 355 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 SLC7A10Q9NS82 523 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 C11orf94C9JXX5 98 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 SFT2D2O95562 160 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 FTH1P19P0C7X4 201 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 CXCL2P19875 107 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 CD22P20273 847 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 B4GALNT1Q00973 533 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 TMEM52BQ4KMG9 183 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 SLC35E3Q7Z769 313 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 WFDC5Q8TCV5 224 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 MYEOVQ96EZ4 313 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 TMEM70Q9BUB7 260 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 F11RQ9Y624 299 aaKnown RBP8.55□□□□□ -1.04
SMAD9-203ENST00000399275 FIGNL2A6NMB9 653 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 SLC17A2O00624 439 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 CFDP00746 253 aaPredicted RBP8.55□□□□□ -1.04
SMAD9-203ENST00000399275 SMIM17P0DL12 118 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 OTX1P32242 354 aaPredicted RBP8.55□□□□□ -1.04
SMAD9-203ENST00000399275 MRPL58Q14197 206 aaKnown RBP8.55□□□□□ -1.04
SMAD9-203ENST00000399275 ISXQ2M1V0 245 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 ZNF788Q6ZQV5 615 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 DIO2Q92813 273 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 C4orf47A7E2U8 309 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 PGA3P0DJD8 388 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 CD40P25942 277 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 FAM71F2Q6NXP2 309 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 STXBP6Q8NFX7 210 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 MYOZ3Q8TDC0 251 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 WDR13Q9H1Z4 485 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 SEPSECSQ9HD40 501 aaKnown RBP8.55□□□□□ -1.04
SMAD9-203ENST00000399275 SLC2A4RGQ9NR83 387 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 A0A1B0GWJ7 208 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 H0Y980 276 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 OR4A8P0C604 315 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 ZNF660Q6AZW8 331 aaPredicted RBP8.55□□□□□ -1.04
SMAD9-203ENST00000399275 OR10G4Q8NGN3 311 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 OR10G9Q8NGN4 311 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 OR10G7Q8NGN6 311 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 MRGPRDQ8TDS7 321 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 OR5AC2Q9NZP5 309 aa8.55□□□□□ -1.04
SMAD9-203ENST00000399275 FAM221AA4D161 298 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 DNASE2O00115 360 aaPredicted RBP8.54□□□□□ -1.04
SMAD9-203ENST00000399275 UBE2CO00762 179 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 MEF2CQ06413 473 aaPredicted RBP8.54□□□□□ -1.04
SMAD9-203ENST00000399275 KCNAB1Q14722 419 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 METRNLQ641Q3 311 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 DMKNQ6E0U4 476 aaPredicted RBP8.54□□□□□ -1.04
SMAD9-203ENST00000399275 RTL10Q7L3V2 364 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 GLRX5Q86SX6 157 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 C10orf111Q8N326 155 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 CYB561D1Q8N8Q1 229 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 PTPMT1Q8WUK0 201 aaPredicted RBP8.54□□□□□ -1.04
SMAD9-203ENST00000399275 ERGIC1Q969X5 290 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 SAP30LQ9HAJ7 183 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 IGHG1P01857 330 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 SEC11BP0C7V7 166 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 FGF5P12034 268 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 IGFBP6P24592 240 aaPredicted RBP8.54□□□□□ -1.04
SMAD9-203ENST00000399275 NAAAQ02083 359 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 UBE2V1Q13404 147 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 LINC00696Q6ZRV3 163 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 TSACCQ96A04 125 aaPredicted RBP8.54□□□□□ -1.04
SMAD9-203ENST00000399275 ZNF775Q96BV0 537 aaPredicted RBP8.54□□□□□ -1.04
SMAD9-203ENST00000399275 PBX4Q9BYU1 374 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 CES1P1Q9UKY3 287 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 ZNF257Q9Y2Q1 563 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 HS3ST3A1Q9Y663 406 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 SHROOM3Q8TF72 1996 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 A0A0A6YYD5 115 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 LOC102725191A0A1B0GVB3 256 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 TRDCB7Z8K6 153 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 RCC1P18754 421 aaPredicted RBP8.54□□□□□ -1.04
SMAD9-203ENST00000399275 POU3F2P20265 443 aaPredicted RBP8.54□□□□□ -1.04
SMAD9-203ENST00000399275 RAB9AP51151 201 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 NHLRC3Q5JS37 347 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 PHF19Q5T6S3 580 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 PWWP2BQ6NUJ5 590 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 OR2K2Q8NGT1 345 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 ASB5Q8WWX0 329 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 HTR5AP47898 357 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 THSD4Q6ZMP0 1018 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 ZNF764Q96H86 408 aaPredicted RBP8.54□□□□□ -1.04
SMAD9-203ENST00000399275 LINC00615Q96LM1 132 aaPredicted RBP8.54□□□□□ -1.04
SMAD9-203ENST00000399275 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
SMAD9-203ENST00000399275 MRPL16Q9NX20 251 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms