RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 A0A1W2PPC4 97 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 CST7O76096 145 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 KCNMB1Q16558 191 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 SNAI3Q3KNW1 292 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 OR5C1Q8NGR4 320 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 FRZBQ92765 325 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 MRGPRX4Q96LA9 322 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 BCO1Q9HAY6 547 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 GEMIN2O14893 280 aaKnown RBP12.13□□□□□ -0.47
APOB-202ENST00000399256 EPHA1P21709 976 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 GLIPR1P48060 266 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 RSPO1Q2MKA7 263 aaPredicted RBP12.13□□□□□ -0.47
APOB-202ENST00000399256 PHYHD1Q5SRE7 291 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 OXGR1Q96P68 337 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 SYT3Q9BQG1 590 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 GLRX2Q9NS18 164 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 RALGAPA1Q6GYQ0 2036 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 TRBV11-1A0A0K0K1C0 115 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 A0A0U1RQV5 110 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 A0A1B0GX78 115 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 OR5H1A6NKK0 313 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 PITX3O75364 302 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 CD63P08962 238 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 JMJD7P0C870 316 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 AADACP22760 399 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 DDTP30046 118 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 GUCA1AP43080 201 aaPredicted RBP12.13□□□□□ -0.47
APOB-202ENST00000399256 LSM6P62312 80 aaKnown RBP12.13□□□□□ -0.47
APOB-202ENST00000399256 HIST3H3Q16695 136 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 FAM69BQ5VUD6 431 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 SNIP1Q8TAD8 396 aaKnown RBP12.13□□□□□ -0.47
APOB-202ENST00000399256 ABHD5Q8WTS1 349 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 METTL7AQ9H8H3 244 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 UCK1Q9HA47 277 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 FOXD3Q9UJU5 478 aaPredicted RBP12.13□□□□□ -0.47
APOB-202ENST00000399256 MMP17Q9ULZ9 603 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 ASXL3Q9C0F0 2248 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 IGKV1-27A0A075B6S5 117 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 BCAT2O15382 392 aaPredicted RBP12.13□□□□□ -0.47
APOB-202ENST00000399256 MSR1P21757 451 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 NKX2-1P43699 371 aaPredicted RBP12.13□□□□□ -0.47
APOB-202ENST00000399256 DYNLT3P51808 116 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 RPL23AP62750 156 aaKnown RBP12.13□□□□□ -0.47
APOB-202ENST00000399256 EIF3IQ13347 325 aaKnown RBP12.13□□□□□ -0.47
APOB-202ENST00000399256 OR10G3Q8NGC4 313 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 GPHA2Q96T91 129 aa12.13□□□□□ -0.47
APOB-202ENST00000399256 A0A087X0M5 115 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 A0A1B0GX30 115 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 C10orf142B7Z368 130 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 RPL36A-HNRNPH2H7BZ11 118 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 M0R135 149 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 PNLIPP16233 465 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 NDUFB7P17568 137 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 DTYMKP23919 212 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 HERV-K104P61576 105 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 ENDOGQ14249 297 aaKnown RBP12.12□□□□□ -0.47
APOB-202ENST00000399256 CXorf66Q5JRM2 361 aaPredicted RBP12.12□□□□□ -0.47
APOB-202ENST00000399256 REC114Q7Z4M0 266 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 BATF2Q8N1L9 274 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 GJC3Q8NFK1 279 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 OR10AD1Q8NGE0 317 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 ZNF799Q96GE5 643 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 SMOC1Q9H4F8 434 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 C11orf1Q9H5F2 150 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 SRFP11831 508 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 MDKP21741 143 aaPredicted RBP12.12□□□□□ -0.47
APOB-202ENST00000399256 CTSSP25774 331 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 VAMP2P63027 116 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 Q3ZCU0 254 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 Q6ZS52 159 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 DEFB123Q8N688 67 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 TMEM252Q8N6L7 170 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 MOB3AQ96BX8 217 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 FAM210BQ96KR6 192 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 ANGPTL4Q9BY76 406 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 SIRT7Q9NRC8 400 aa12.12□□□□□ -0.47
APOB-202ENST00000399256 ELOA3CA0A087WX78 387 aaPredicted RBP12.11□□□□□ -0.47
APOB-202ENST00000399256 C3orf85A0A1B0GTC6 90 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 BTBD17A6NE02 478 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 PROB1E7EW31 1015 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 ST8SIA5O15466 376 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 HSPA12AO43301 675 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 PTBP3O95758 552 aaKnown RBP12.11□□□□□ -0.47
APOB-202ENST00000399256 HSPB1P04792 205 aaKnown RBP12.11□□□□□ -0.47
APOB-202ENST00000399256 MYF5P13349 255 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 CFHR1Q03591 330 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 ZNF506Q5JVG8 444 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 AKR1C8PQ5T2L2 129 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 C5orf24Q7Z6I8 188 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 TMEM123Q8N131 208 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 C17orf78Q8N4C9 275 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 CCDC71LQ8N9Z2 235 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 PLPP5Q8NEB5 264 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 CLDND2Q8NHS1 167 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 CHRNA10Q9GZZ6 450 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 PLEKHF2Q9H8W4 249 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 PLEK2Q9NYT0 353 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 EXPH5Q8NEV8 1989 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 IGHV3-15A0A0B4J1V0 119 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms