RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 UEVLDQ8IX04 471 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 HIST3H2BBQ8N257 126 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 SLC38A9Q8NBW4 561 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 OR10AD1Q8NGE0 317 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 OR5C1Q8NGR4 320 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 ABHD5Q8WTS1 349 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 FAM210BQ96KR6 192 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 ANXA10Q9UJ72 324 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 VSTM2BA6NLU5 285 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 PRR33A8MZF0 331 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 TSPAN2O60636 221 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 GUSBP08236 651 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 MMP7P09237 267 aaPredicted RBP8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 APLNRP35414 380 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 PMELP40967 661 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 CSNK1A1P48729 337 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 VAMP2P63027 116 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 FZD2Q14332 565 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 CXorf66Q5JRM2 361 aaPredicted RBP8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 DPPA2Q7Z7J5 298 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 THNSL2Q86YJ6 484 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 OR5T1Q8NG75 326 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 LMX1AQ8TE12 382 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 TMEM234Q8WY98 164 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 GALNT14Q96FL9 552 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 GINS3Q9BRX5 216 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 NAA60Q9H7X0 242 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 IL23AQ9NPF7 189 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 SLC2A9Q9NRM0 540 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNF814B7Z6K7 855 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 HSPB6O14558 160 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 HSD17B6O14756 317 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 SLC31A2O15432 143 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 SEMA4FO95754 770 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 IGKV3-11P04433 115 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 CTSDP07339 412 aaPredicted RBP8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 GUCA1AP43080 201 aaPredicted RBP8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 MYBPHQ13203 477 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 DEFB133Q30KQ1 61 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 COMMD1Q8N668 190 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 SLC35G3Q8N808 338 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 MALSU1Q96EH3 234 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 GAB2Q9UQC2 676 aa8.6□□□□□ -1.03
PTCHD4-202ENST00000398738 CEACAM18A8MTB9 384 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 TERTO14746 1132 aaKnown RBP8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 TNFRSF10CO14798 259 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 DUSP1P28562 367 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 OR2C3Q8N628 320 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 PLPP5Q8NEB5 264 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 OR14L1PQ8NHC6 308 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 TVP23CQ96ET8 276 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 TUBD1Q9UJT1 453 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 UBE2J1Q9Y385 318 aaPredicted RBP8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 STRAPQ9Y3F4 350 aaKnown RBP8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 ESPL1Q14674 2120 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 TRANK1O15050 2925 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 IGHV3-15A0A0B4J1V0 119 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 IGSF23A1L1A6 192 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 TLCD2A6NGC4 264 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 K7N7A8 449 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 TCAPO15273 167 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 HMGB3O15347 200 aaKnown RBP8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 SRP19P09132 144 aaKnown RBP8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 IL2RGP31785 369 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 ALDH3B1P43353 468 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 ID3Q02535 119 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 TMEM187Q14656 261 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 OR8G1Q15617 311 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 PIGYQ3MUY2 71 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 CMTM1Q8IZ96 169 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 LGI3Q8N145 548 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 TMEM171Q8WVE6 324 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 NAT6Q93015 286 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 RBM24Q9BX46 236 aaKnown RBP8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 LINC01565O15544 149 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 IGHG1P01857 330 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 NR2C1P13056 603 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNF43P17038 809 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 EN2P19622 333 aaPredicted RBP8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 FUT3P21217 361 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 GNRHRP30968 328 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNF154Q13106 437 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 IZUMO4Q1ZYL8 232 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 FAM69BQ5VUD6 431 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 DOK3Q7L591 496 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 TP53RKQ96S44 253 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 LRFN1Q9P244 771 aa8.59□□□□□ -1.03
PTCHD4-202ENST00000398738 FRYLO94915 3013 aa8.59□□□□□ -1.04
PTCHD4-202ENST00000398738 SERPINE3A8MV23 424 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 IFNL4K9M1U5 179 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 EFNA2O43921 213 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 OR2J2O76002 312 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 DYNLT3P51808 116 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 HERV-K104P61576 105 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 PKIAP61925 76 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 MRPS34P82930 218 aaKnown RBP8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 SMAD4Q13485 552 aaKnown RBP8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 HIKESHIQ53FT3 197 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 SPSB3Q6PJ21 355 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 LYZL4Q96KX0 146 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms