RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PLPPR2Q96GM1 343 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 SLC26A1Q9H2B4 701 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 PPP1R14DQ9NXH3 145 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 MRPS18BQ9Y676 258 aaKnown RBP12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 HLA-DQB1P01920 261 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 CRHP06850 196 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 RRASP10301 218 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 RAB13P51153 203 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 TNFAIP6P98066 277 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 OR2C3Q8N628 320 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 GMPPAQ96IJ6 420 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 ALX4Q9H161 411 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 A0A1W2PNV4 684 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 TRDCB7Z8K6 153 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 OR2C1O95371 312 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 HRASP01112 189 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 LPAR6P43657 344 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 LINC01590Q5TEZ4 76 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 INO80CQ6PI98 192 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 GPR27Q9NS67 375 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 PSG11Q9UQ72 335 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 NPIPB9F8W1W9 429 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 ZIC2O95409 532 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 ZNF239Q16600 458 aaKnown RBP12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 OR11H7Q8NGC8 314 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 OR5D13Q8NGL4 314 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 OR4F5Q8NH21 305 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 OR4F4Q96R69 305 aa12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 MRPL22Q9NWU5 206 aaKnown RBP12.47□□□□□ -0.41
PCDHGA11-201ENST00000398587 ONECUT2O95948 504 aa12.46□□□□□ -0.41
PCDHGA11-201ENST00000398587 C17orf78Q8N4C9 275 aa12.46□□□□□ -0.41
PCDHGA11-201ENST00000398587 TMEM251Q8N6I4 163 aa12.46□□□□□ -0.41
PCDHGA11-201ENST00000398587 ZNF519Q8TB69 540 aa12.46□□□□□ -0.41
PCDHGA11-201ENST00000398587 PDGFBP01127 241 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA11-201ENST00000398587 THY1P04216 161 aa12.46□□□□□ -0.41
PCDHGA11-201ENST00000398587 ISG15P05161 165 aa12.46□□□□□ -0.41
PCDHGA11-201ENST00000398587 MGST1P10620 155 aaKnown RBP12.46□□□□□ -0.41
PCDHGA11-201ENST00000398587 PCOLCEQ15113 449 aa12.46□□□□□ -0.41
PCDHGA11-201ENST00000398587 BHLHA15Q7RTS1 189 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA11-201ENST00000398587 ATPIF1Q9UII2 106 aa12.46□□□□□ -0.41
PCDHGA11-201ENST00000398587 NPIPB13A6NJU9 1138 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 NPIPB4C9JG80 1138 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 TRIM77I1YAP6 450 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 RAB7AP51149 207 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 RPS4XP62701 263 aaKnown RBP12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 HIKESHIQ53FT3 197 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 SLC23A3Q6PIS1 610 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 UNQ9370/PRO34162Q6UXP9 181 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 POM121L2Q96KW2 1035 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 AP1S3Q96PC3 154 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 ZMIZ1Q9ULJ6 1067 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 SCN5AQ14524 2016 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 ZNF705GA8MUZ8 300 aaPredicted RBP12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 PPP5D1E7EU14 171 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 K7EQM0 130 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 CDIPTO14735 213 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 PPP1R2P9O14990 202 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 CA11O75493 328 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 PJVKQ0ZLH3 352 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 OR6C3Q9NZP0 311 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 CACNG5Q9UF02 275 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 GAB2Q9UQC2 676 aa12.46□□□□□ -0.42
PCDHGA11-201ENST00000398587 RIF1Q5UIP0 2472 aaKnown RBP12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 SBF1O95248 1867 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 PPYP01298 95 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 CBR1P16152 277 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 FGF7P21781 194 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 PMP22Q01453 160 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 HOGA1Q86XE5 327 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 NMES1Q9C002 83 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 UQCC1Q9NVA1 299 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 TINAGQ9UJW2 476 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 TRBV5-7A0A0A0MS05 114 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 AQP7O14520 342 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 GNB1P62873 340 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 PSG4Q00888 419 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 KIAA0141Q14154 515 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 Q3ZCU0 254 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 C1orf100Q5SVJ3 147 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 LIAT1Q6ZQX7 453 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 MRGPRDQ8TDS7 321 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 MITD1Q8WV92 249 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 RPUSD4Q96CM3 377 aaKnown RBP12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 SMIM7Q9BQ49 75 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 SLC7A10Q9NS82 523 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 FBXL17Q9UF56 701 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 IGKV3D-11A0A0A0MRZ8 115 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 RNASEK-C17orf49H0YIS7 233 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 FCGR3BO75015 233 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 COX6A1P12074 109 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 EGR4Q05215 589 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 LYG1Q8N1E2 194 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 C9orf62Q8N4C0 152 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 OR5C1Q8NGR4 320 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 SOX7Q9BT81 388 aa12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 ZNF71Q9NQZ8 489 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA11-201ENST00000398587 PIN1P1O15428 100 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 TRAF3IP2O43734 574 aaPredicted RBP12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 OR5G3P0C626 314 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 VDAC1P21796 283 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms