RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 FAM90A23PA8MXZ1 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 TGFBR3LH3BV60 316 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 ANGPTL7O43827 346 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 KLK3P07288 261 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 CA3P07451 260 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A15PP0C7V4 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A13PP0C7W8 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A14PP0C7W9 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A24PP0C7X0 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 GABRG2P18507 467 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 CCKARP32238 428 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 PPP1CBP62140 327 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 TGFBR3Q03167 851 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 TMEM267Q0VDI3 215 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 GAMTQ14353 236 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 IL22RA1Q8N6P7 574 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 ZPLD1Q8TCW7 415 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 SSC4DQ8WTU2 575 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 ZNRF4Q8WWF5 429 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 SLAMF6Q96DU3 332 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 SMIM8Q96KF7 97 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 G6PC2Q9NQR9 355 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 PTRH2Q9Y3E5 179 aaKnown RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FOLR2P14207 255 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 CDX1P47902 265 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 UCP2P55851 309 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 ERVK-16P61578 105 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 QRFPP83859 136 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 CLN3Q13286 438 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 ASPHD2Q6ICH7 369 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 KTI12Q96EK9 354 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 ANGPTL4Q9BY76 406 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 OR51B6Q9H340 312 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 DCAF16Q9NXF7 216 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 A0A0U1RQV5 110 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 PLPP3O14495 311 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 GNG10P50151 68 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 GRB2P62993 217 aaKnown RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 TRIM61Q5EBN2 209 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 SPANXN5Q5MJ07 72 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 OR6X1Q8NH79 312 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 GTF3AQ92664 365 aaKnown RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 CORO2AQ92828 525 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 PLEKHF2Q9H8W4 249 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 ZDHHC8Q9ULC8 765 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 VSIG4Q9Y279 399 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 DTX4Q9Y2E6 619 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 TRAV14DV4A0A0A6YYC5 116 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 A0A1W2PR77 199 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 TRAF3IP2O43734 574 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 TTRP02766 147 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 ID4P47928 161 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 LBHQ53QV2 105 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 RHBDD2Q6NTF9 364 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 SHISA6Q6ZSJ9 500 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 CCL4L1Q8NHW4 92 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 PBOV1Q9GZY1 135 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 TREM2Q9NZC2 230 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 KLHDC2Q9Y2U9 406 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 LRP12Q9Y561 859 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 KIAA1324LA8MWY0 1029 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 SPINK4O60575 86 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 CD79AP11912 226 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 HSF1Q00613 529 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF92Q03936 586 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 PLP2Q04941 152 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 ABLIM2Q6H8Q1 611 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF880Q6PDB4 577 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 FOXL2NBQ6ZUU3 175 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 DAZAP1Q96EP5 407 aaKnown RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 TBX15Q96SF7 602 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 NAA11Q9BSU3 229 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 RCC2Q9P258 522 aaKnown RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 ASXL3Q9C0F0 2248 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 DUXBA0A1W2PPF3 345 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 TP53I11O14683 189 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 CDS2O95674 445 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 HIST1H1DP16402 221 aaKnown RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 CLDN17P56750 224 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 SLC10A1Q14973 349 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 TMEM241Q24JQ0 296 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 NKAIN1Q4KMZ8 207 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 DGAT2L6Q6ZPD8 337 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 OR10A7Q8NGE5 316 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 LPAR5Q9H1C0 372 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 A0A1B0GX78 115 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 TRAPPC2LH3BP13 241 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 CTSDP07339 412 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 KLK2P20151 261 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 OTX2P32243 289 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 RPS15P62841 145 aaKnown RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 DNLZQ5SXM8 178 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 C10orf128Q5T292 105 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 MRPL21Q7Z2W9 205 aaKnown RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF775Q96BV0 537 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 PSENENQ9NZ42 101 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 NUP210Q8TEM1 1887 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF729A6NN14 1252 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF814B7Z6K7 855 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 USF1P22415 310 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms