RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 PIGYQ3MUY2 71 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 H2BFWTQ7Z2G1 175 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 OR8H3Q8N146 312 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 ABHD1Q96SE0 405 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 MFFQ9GZY8 342 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 LPAR3Q9UBY5 353 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 CLN8Q9UBY8 286 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 MAB21L2Q9Y586 359 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 NDUFA2O43678 99 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 OR8U9P0C7N5 309 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 CA7P43166 264 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 CLEC2AQ6UVW9 174 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 OR8U1Q8NH10 309 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 MRGPRDQ8TDS7 321 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 GLYATL2Q8WU03 294 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 SEC22CQ9BRL7 303 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 REPIN1Q9BWE0 567 aaKnown RBP7.13□□□□□ -1.27
PTPRD-204ENST00000397606 NPAP1Q9NZP6 1156 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 ZNF230Q9UIE0 474 aaPredicted RBP7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A10PA6NDY2 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A18PA6NE21 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A16PA6NEW6 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 OOEPA6NGQ2 149 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A20PA6NIJ5 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A8PA6NJQ4 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A7PA6NKC0 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A22PA8MWA6 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A12PA8MX19 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A5PA8MXJ8 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A23PA8MXZ1 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 PIN1P1O15428 100 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 ST8SIA5O15466 376 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 CEACAM4O75871 244 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A15PP0C7V4 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A13PP0C7W8 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A14PP0C7W9 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 FAM90A24PP0C7X0 464 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 DTYMKP23919 212 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 PRDX2P32119 198 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 CEACAM6P40199 344 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 OR3A1P47881 315 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 PIGPP57054 158 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 OXA1LQ15070 435 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 IGFBP7Q16270 282 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 IGFL2Q6UWQ7 119 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 CELF2-AS1Q8N7Q2 184 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 TINAGL1Q9GZM7 467 aaPredicted RBP7.13□□□□□ -1.27
PTPRD-204ENST00000397606 RHOFQ9HBH0 211 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 DNAH12Q6ZR08 3092 aa7.13□□□□□ -1.27
PTPRD-204ENST00000397606 ZSCAN5BA6NJL1 495 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 LMX1BO60663 402 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 ZNF205O95201 554 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 DHODHQ02127 395 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 PRAMEF5Q5TYX0 476 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 CD276Q5ZPR3 534 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 RBMS3Q6XE24 437 aaKnown RBP7.12□□□□□ -1.27
PTPRD-204ENST00000397606 LRRTM1Q86UE6 522 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 WDR13Q9H1Z4 485 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 KIAA1456Q9P272 454 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 ZNF107Q9UII5 783 aaPredicted RBP7.12□□□□□ -1.27
PTPRD-204ENST00000397606 ANXA10Q9UJ72 324 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 RNF150Q9ULK6 438 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 GSTZ1O43708 216 aaPredicted RBP7.12□□□□□ -1.27
PTPRD-204ENST00000397606 PRRX1P54821 245 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 UBE2V2Q15819 145 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 NOXA1Q86UR1 476 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 MSI2Q96DH6 328 aaKnown RBP7.12□□□□□ -1.27
PTPRD-204ENST00000397606 NUDT16L1Q9BRJ7 211 aaKnown RBP7.12□□□□□ -1.27
PTPRD-204ENST00000397606 HIPK2Q9H2X6 1198 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 NKX2-6A6NCS4 301 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 TRDCB7Z8K6 153 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 FPR2P25090 351 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 SNTB1Q13884 538 aaKnown RBP7.12□□□□□ -1.27
PTPRD-204ENST00000397606 MFSD4AQ8N468 514 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 ZDHHC22Q8N966 263 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 SUMF2Q8NBJ7 301 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 ITPKCQ96DU7 683 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 RASL12Q9NYN1 266 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 CACFD1Q9UGQ2 172 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 V9GYS6 101 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 NAT2P11245 290 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 PI3P19957 117 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 PLA2G5P39877 138 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 HOXA1P49639 335 aaPredicted RBP7.12□□□□□ -1.27
PTPRD-204ENST00000397606 BAMBIQ13145 260 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 SPTAN1Q13813 2472 aaKnown RBP7.12□□□□□ -1.27
PTPRD-204ENST00000397606 OR10V1Q8NGI7 309 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 UBALD1Q8TB05 177 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 SEC22AQ96IW7 307 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 ZNF488Q96MN9 340 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 DDOQ99489 341 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.12□□□□□ -1.27
PTPRD-204ENST00000397606 AK3Q9UIJ7 227 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 ZNF407Q9C0G0 2248 aa7.12□□□□□ -1.27
PTPRD-204ENST00000397606 MGST3O14880 152 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 IFNA4P05014 189 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 CD80P33681 288 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 TMEM128Q5BJH2 165 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 RPS4Y2Q8TD47 263 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 OR5P3Q8WZ94 311 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms