RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 NPIPB7O75200 414 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 SCRG1O75711 98 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 SCAF4O95104 1147 aaKnown RBP4.4□□□□□ -1.71
SSR1-202ENST00000397511 MT-ATP6P00846 226 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 VSIG8P0DPA2 414 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 SPINK2P20155 84 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 CD82P27701 267 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 RPL12P30050 165 aaKnown RBP4.4□□□□□ -1.71
SSR1-202ENST00000397511 ZNF93P35789 620 aaPredicted RBP4.4□□□□□ -1.71
SSR1-202ENST00000397511 CDKN1BP46527 198 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 RPL29P47914 159 aaKnown RBP4.4□□□□□ -1.71
SSR1-202ENST00000397511 GLIPR1P48060 266 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 ZNF41P51814 821 aaPredicted RBP4.4□□□□□ -1.71
SSR1-202ENST00000397511 RAB32Q13637 225 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 TMEM176BQ3YBM2 270 aaPredicted RBP4.4□□□□□ -1.71
SSR1-202ENST00000397511 HIKESHIQ53FT3 197 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 FBXW9Q5XUX1 488 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 WDR73Q6P4I2 378 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 GUSBP11Q6P575 273 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 ZNF705AQ6ZN79 300 aaPredicted RBP4.4□□□□□ -1.71
SSR1-202ENST00000397511 FAM57BQ71RH2 274 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 SSX7Q7RTT5 188 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 SLC16A14Q7RTX9 510 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 OR10S1Q8NGN2 331 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 OR4K15Q8NH41 348 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 ASB10Q8WXI3 467 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 THRSPQ92748 146 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 C2orf50Q96LR7 162 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 SERINC1Q9NRX5 453 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 GSKIPQ9P0R6 139 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 GPR179Q6PRD1 2367 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 BORCS7-ASMTA0A0B4J1R7 106 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 BLACEA4D250 179 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 FTCDNL1E5RQL4 147 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 KNG1P01042 644 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 PGA4P0DJD7 388 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 PGA5P0DJD9 388 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 OR5H8P0DN80 308 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 ZNF20P17024 532 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 CFPP27918 469 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 EMP2P54851 167 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 NXPH1P58417 271 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 C17orf67Q0P5P2 114 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 NKAIN1Q4KMZ8 207 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 PHF19Q5T6S3 580 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 GLIPR1L1Q6UWM5 242 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 OR1P1Q8NH06 330 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 OR51F2Q8NH61 342 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 TMEM234Q8WY98 164 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 MRGPRFQ96AM1 343 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 TVP23CQ96ET8 276 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 DIRC2Q96SL1 478 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 LPAR2Q9HBW0 351 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 GPR84Q9NQS5 396 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 GPR173Q9NS66 373 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 SEMA5BQ9P283 1151 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 FBXL17Q9UF56 701 aa4.4□□□□□ -1.71
SSR1-202ENST00000397511 MAP1BP46821 2468 aaKnown RBP4.39□□□□□ -1.71
SSR1-202ENST00000397511 A0A0A6YYH2 397 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 A6NJ64 397 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 CA11O75493 328 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 SEC11BP0C7V7 166 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 PNLIPP16233 465 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 GLB1P16278 677 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 SERPINA2P20848 420 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 FCGR2CP31995 323 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 CEBPGP53567 150 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 ZNF121P58317 390 aaPredicted RBP4.39□□□□□ -1.71
SSR1-202ENST00000397511 ROM1Q03395 351 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 OR5I1Q13606 314 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 ARFRP1Q13795 201 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 PDCD1Q15116 288 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 TMEM128Q5BJH2 165 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 C1orf194Q5T5A4 169 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 FAM166AQ6J272 317 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 DEGS2Q6QHC5 323 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 CLEC2AQ6UVW9 174 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 PLXDC2Q6UX71 529 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 SMIM15Q7Z3B0 74 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 FAM185AQ8N0U4 392 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 OR2AJ1Q8NGZ0 328 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 EXTL1Q92935 676 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 DDIT4LQ96D03 193 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 KCNK17Q96T54 332 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 SYT3Q9BQG1 590 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 NIPSNAP3BQ9BS92 247 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 FAAP24Q9BTP7 215 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 GSX1Q9H4S2 264 aaPredicted RBP4.39□□□□□ -1.71
SSR1-202ENST00000397511 CPAMD8Q8IZJ3 1885 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 B4DEV8 164 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 NUDT21O43809 227 aaKnown RBP4.39□□□□□ -1.71
SSR1-202ENST00000397511 CIDEAO60543 219 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 DBHP09172 617 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 MMP7P09237 267 aaPredicted RBP4.39□□□□□ -1.71
SSR1-202ENST00000397511 OR4A8P0C604 315 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 PATE4P0C8F1 98 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 PGA3P0DJD8 388 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 ZNF43P17038 809 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 IGFBP3P17936 291 aaPredicted RBP4.39□□□□□ -1.71
SSR1-202ENST00000397511 CCKARP32238 428 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms