RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 COL8A2P25067 703 aa17.79■□□□□ 0.44
CPNE1-204ENST00000397443 GNG2P59768 71 aa17.79■□□□□ 0.44
CPNE1-204ENST00000397443 IL13RA2Q14627 380 aa17.79■□□□□ 0.44
CPNE1-204ENST00000397443 MPV17LQ2QL34 196 aa17.79■□□□□ 0.44
CPNE1-204ENST00000397443 HIST2H2BCQ6DN03 193 aa17.79■□□□□ 0.44
CPNE1-204ENST00000397443 HDHD3Q9BSH5 251 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-204ENST00000397443 NLKQ9UBE8 527 aa17.79■□□□□ 0.44
CPNE1-204ENST00000397443 GABARAPH6UMI1 98 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 SH2D1BO14796 132 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 GABRA2P47869 451 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 INPP1P49441 399 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 ZNF146Q15072 292 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 HFEQ30201 348 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 SPIN3Q5JUX0 258 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 STEAP3Q658P3 488 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 Q6P435 159 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 SUMF2Q8NBJ7 301 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 C15orf40Q8WUR7 153 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 NRGNQ92686 78 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 YIPF5Q969M3 257 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 NUDT16L1Q9BRJ7 211 aaKnown RBP17.78■□□□□ 0.44
CPNE1-204ENST00000397443 RABL2AQ9UBK7 228 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-204ENST00000397443 METRNQ9UJH8 293 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 RABL2BQ9UNT1 228 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 WIPI2Q9Y4P8 454 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 TRAV24A0A0B4J272 114 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 OR2AT4A6NND4 320 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 TMEM178BH3BS89 294 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 CTDSPLO15194 276 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 PSG2P11465 335 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 HACD4Q5VWC8 232 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 TRAPPC6BQ86SZ2 158 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 LIME1Q9H400 295 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 RASL12Q9NYN1 266 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 AK3Q9UIJ7 227 aa17.78■□□□□ 0.44
CPNE1-204ENST00000397443 FBXO9Q9UK97 447 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A10PA6NDY2 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A18PA6NE21 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A16PA6NEW6 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A20PA6NIJ5 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A8PA6NJQ4 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A7PA6NKC0 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A22PA8MWA6 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A12PA8MX19 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A5PA8MXJ8 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A23PA8MXZ1 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 KNG1P01042 644 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 GSTP1P09211 210 aaKnown RBP17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A15PP0C7V4 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A13PP0C7W8 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A14PP0C7W9 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 FAM90A24PP0C7X0 464 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 MICBQ29980 383 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 ZNF57Q68EA5 555 aaPredicted RBP17.77■□□□□ 0.44
CPNE1-204ENST00000397443 LINC00596Q86U02 117 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 ST8SIA4Q92187 359 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 CCL19Q99731 98 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 CHST6Q9GZX3 395 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 GLS2Q9UI32 602 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 PTPN13Q12923 2485 aa17.77■□□□□ 0.44
CPNE1-204ENST00000397443 IGKV1D-17A0A075B6S4 117 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 ORC5O43913 435 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 SSX5O60225 188 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 GDNFP39905 211 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 PAN3Q58A45 887 aaKnown RBP17.76■□□□□ 0.43
CPNE1-204ENST00000397443 C20orf204Q6ZNR8 217 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 FAM90A1Q86YD7 464 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 LYSMD2Q8IV50 215 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 C1orf87Q8N0U7 546 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 CD177Q8N6Q3 437 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 GVQW1Q8N7I0 195 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 TRIM63Q969Q1 353 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 PSMG3-AS1Q96PY0 264 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 DPCDQ9BVM2 203 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-204ENST00000397443 PPA2Q9H2U2 334 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 HSF4Q9ULV5 492 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 TANC2Q9HCD6 1990 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 MCRIP1C9JLW8 97 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 SLC33A1O00400 549 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-204ENST00000397443 GSTZ1O43708 216 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-204ENST00000397443 GYPAP02724 150 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 LPLP06858 475 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 PRDX2P32119 198 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 MRPS10P82664 201 aaKnown RBP17.76■□□□□ 0.43
CPNE1-204ENST00000397443 COL10A1Q03692 680 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 CARTPTQ16568 116 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 ZNF181Q2M3W8 571 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 ASCC1Q8N9N2 400 aaKnown RBP17.76■□□□□ 0.43
CPNE1-204ENST00000397443 RCC2Q9P258 522 aaKnown RBP17.76■□□□□ 0.43
CPNE1-204ENST00000397443 ZNF230Q9UIE0 474 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-204ENST00000397443 ABCA12Q86UK0 2595 aa17.76■□□□□ 0.43
CPNE1-204ENST00000397443 OOEPA6NGQ2 149 aa17.75■□□□□ 0.43
CPNE1-204ENST00000397443 SERPINE3A8MV23 424 aa17.75■□□□□ 0.43
CPNE1-204ENST00000397443 H7C417 338 aa17.75■□□□□ 0.43
CPNE1-204ENST00000397443 TPPPO94811 219 aa17.75■□□□□ 0.43
CPNE1-204ENST00000397443 MELTFP08582 738 aa17.75■□□□□ 0.43
CPNE1-204ENST00000397443 DAOP14920 347 aa17.75■□□□□ 0.43
CPNE1-204ENST00000397443 MRPS15P82914 257 aaKnown RBP17.75■□□□□ 0.43
CPNE1-204ENST00000397443 GPX8Q8TED1 209 aa17.75■□□□□ 0.43
CPNE1-204ENST00000397443 ZFAND2BQ8WV99 257 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms