RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 EDARQ9UNE0 448 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 PPP1R3CQ9UQK1 317 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 LRRK2Q5S007 2527 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 UBR5O95071 2799 aaPredicted RBP11.46□□□□□ -0.58
MCF2L-209ENST00000397036 hCG_1807616A0A1W2PRN6 198 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 MCRIP1C9JLW8 97 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 DEGS1O15121 323 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 FSTL3O95633 263 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 CD74P04233 296 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 RNF224P0DH78 156 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 TAS2R19P59542 299 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 IKZF1Q13422 519 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 ARFRP1Q13795 201 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 SPRNQ5BIV9 151 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 OLFML2AQ68BL7 652 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 C11orf71Q6IPW1 123 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 HOGA1Q86XE5 327 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 SULT4A1Q9BR01 284 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 FAAP24Q9BTP7 215 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 SAP30LQ9HAJ7 183 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 DECR2Q9NUI1 292 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 ELF5Q9UKW6 265 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-209ENST00000397036 CACNG2Q9Y698 323 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 TRBV6-6A0A0A6YYG2 114 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 TRAV24A0A0B4J272 114 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 IGHV3-64DA0A0J9YX35 117 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 LRRC30A6NM36 301 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-209ENST00000397036 CD8AP01732 235 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 SLC6A1P30531 599 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 FAUP35544 74 aaKnown RBP11.45□□□□□ -0.58
MCF2L-209ENST00000397036 RFX2P48378 723 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 KCNJ3P48549 501 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 CCL8P80075 99 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 TRIM16LQ309B1 348 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 NKAPLQ5M9Q1 402 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 Q6ZNX1 250 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 Q6ZS49 121 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 TRAPPC6BQ86SZ2 158 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 C1orf87Q8N0U7 546 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 GAPTQ8N292 157 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 CENPSQ8N2Z9 138 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 NUDCD2Q8WVJ2 157 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 CMSS1Q9BQ75 279 aaKnown RBP11.45□□□□□ -0.58
MCF2L-209ENST00000397036 IL36RNQ9UBH0 155 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 AK3Q9UIJ7 227 aa11.45□□□□□ -0.58
MCF2L-209ENST00000397036 H7C1Q1 480 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 OR2H2O95918 312 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 HAND1O96004 215 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 NAPSAO96009 420 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 AKAIN1P0CW23 69 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 IRF2P14316 349 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 MUC1P15941 1255 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-209ENST00000397036 MDH2P40926 338 aaKnown RBP11.44□□□□□ -0.58
MCF2L-209ENST00000397036 MRPS11P82912 194 aaKnown RBP11.44□□□□□ -0.58
MCF2L-209ENST00000397036 PAX5Q02548 391 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 ACTBL2Q562R1 376 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 ATAD3CQ5T2N8 411 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 TEX36Q5VZQ5 186 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 SUMF2Q8NBJ7 301 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 TRAF4Q9BUZ4 470 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-209ENST00000397036 DPCDQ9BVM2 203 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-209ENST00000397036 WDR13Q9H1Z4 485 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 HRASLSQ9HDD0 168 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 ZNF581Q9P0T4 197 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 COPZ2Q9P299 210 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 NLKQ9UBE8 527 aa11.44□□□□□ -0.58
MCF2L-209ENST00000397036 CACNA1DQ01668 2161 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 A0A1W2PPR1 153 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 SLC33A1O00400 549 aaPredicted RBP11.43□□□□□ -0.58
MCF2L-209ENST00000397036 WNT9BO14905 357 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 ZNF44P15621 663 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 DUSP1P28562 367 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 MRPS15P82914 257 aaKnown RBP11.43□□□□□ -0.58
MCF2L-209ENST00000397036 TLE4Q04727 773 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 MEF2DQ14814 521 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 PDCD1Q15116 288 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 RNASE12Q5GAN4 147 aaKnown RBP11.43□□□□□ -0.58
MCF2L-209ENST00000397036 STEAP1BQ6NZ63 245 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 NRARPQ7Z6K4 114 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 RTN4RL2Q86UN3 420 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 BATF2Q8N1L9 274 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 RAB1BQ9H0U4 201 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 C12orf4Q9NQ89 552 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 IFT46Q9NQC8 304 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 WIPI2Q9Y4P8 454 aa11.43□□□□□ -0.58
MCF2L-209ENST00000397036 LINC00854A0A1B0GVQ3 168 aa11.42□□□□□ -0.58
MCF2L-209ENST00000397036 FAM240BA0A1B0GVZ2 78 aa11.42□□□□□ -0.58
MCF2L-209ENST00000397036 RFPL4AA6NLU0 287 aa11.42□□□□□ -0.58
MCF2L-209ENST00000397036 OR2AT4A6NND4 320 aa11.42□□□□□ -0.58
MCF2L-209ENST00000397036 ZNF736B4DX44 427 aaPredicted RBP11.42□□□□□ -0.58
MCF2L-209ENST00000397036 RFPL4AL1F8VTS6 287 aa11.42□□□□□ -0.58
MCF2L-209ENST00000397036 TMEM178BH3BS89 294 aa11.42□□□□□ -0.58
MCF2L-209ENST00000397036 PSG2P11465 335 aa11.42□□□□□ -0.58
MCF2L-209ENST00000397036 EGR1P18146 543 aa11.42□□□□□ -0.58
MCF2L-209ENST00000397036 PRDX2P32119 198 aa11.42□□□□□ -0.58
MCF2L-209ENST00000397036 PLA1AQ53H76 456 aa11.42□□□□□ -0.58
MCF2L-209ENST00000397036 ATPAF1Q5TC12 328 aaPredicted RBP11.42□□□□□ -0.58
MCF2L-209ENST00000397036 ZCCHC24Q8N2G6 241 aaKnown RBP11.42□□□□□ -0.58
MCF2L-209ENST00000397036 ANGPTL6Q8NI99 470 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms