RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PRODHO43272 600 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 E2F6O75461 281 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 JTBO76095 146 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 PRR23D2P0DMB1 279 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-202ENST00000396629 ROM1Q03395 351 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 MFGE8Q08431 387 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-202ENST00000396629 SLC35D3Q5M8T2 416 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 FAM27D1Q5T7N8 215 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 CD300LDQ6UXZ3 194 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 IQCF1Q8N6M8 205 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 OR56B4Q8NH76 319 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 EMG1Q92979 244 aaKnown RBP6.58□□□□□ -1.36
SCFD1-202ENST00000396629 TOMM40LQ969M1 308 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 RNFT2Q96EX2 444 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 GON7Q9BXV9 100 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 CADM1Q9BY67 442 aaKnown RBP6.58□□□□□ -1.36
SCFD1-202ENST00000396629 YIPF3Q9GZM5 350 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 SPAG4Q9NPE6 437 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 FGFR1OP2Q9NVK5 253 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 IL36RNQ9UBH0 155 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 GLS2Q9UI32 602 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 SLC7A11Q9UPY5 501 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 HERC2O95714 4834 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 FAM230AA0A1W2PPH8 454 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 A6NIN4 97 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 LDLRAD4O15165 306 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 HSD17B1P14061 328 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 SLC2A5P22732 501 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 GPR12P47775 334 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 CFHR3Q02985 330 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 HES1Q14469 280 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 ZNF146Q15072 292 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 ZNF829Q3KNS6 432 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-202ENST00000396629 UTF1Q5T230 341 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 ZNF429Q86V71 674 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 Q8IYB0 196 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 ZNF679Q8IYX0 411 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 TEX47Q8TBZ9 253 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 RPEQ96AT9 228 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 NSMCE2Q96MF7 247 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 MROQ9BYG7 248 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 U3KQV3 271 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 FUOMA2VDF0 154 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 ENTPD6O75354 484 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 GP9P14770 177 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 GLIPR1P48060 266 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 RIDAP52758 137 aaKnown RBP6.57□□□□□ -1.36
SCFD1-202ENST00000396629 CDC42P60953 191 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 PPP1R8Q12972 351 aaKnown RBP6.57□□□□□ -1.36
SCFD1-202ENST00000396629 EBI3Q14213 229 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 RBM39Q14498 530 aaKnown RBP6.57□□□□□ -1.36
SCFD1-202ENST00000396629 HNF4GQ14541 408 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 KPNB1Q14974 876 aaKnown RBP6.57□□□□□ -1.36
SCFD1-202ENST00000396629 MICAQ29983 383 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 C17orf58Q2M2W7 97 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 ASPHD1Q5U4P2 390 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 C16orf89Q6UX73 402 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 ELMOD2Q8IZ81 293 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 OR8H3Q8N146 312 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 FAM71E2Q8N5Q1 922 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 OR11H1Q8NG94 326 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 OR4D6Q8NGJ1 314 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 OR9G1Q8NH87 305 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 MYOZ3Q8TDC0 251 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 ABCG5Q9H222 651 aa6.57□□□□□ -1.36
SCFD1-202ENST00000396629 AMMECR1Q9Y4X0 333 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-202ENST00000396629 TRBV2A0A0J9YWF9 115 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 TRIM64CA6NLI5 447 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 J3QR06 171 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 ARPC2O15144 300 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 CCDC22O60826 627 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 INMTO95050 263 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 IGKV1D-33P01593 117 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 IGKV1-33P01594 117 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 IGHG4P01861 327 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 OR8U8P0C7N1 319 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 SPNP16150 400 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 DUSP1P28562 367 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 PTGFRP43088 359 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 MAGEA2P43356 314 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 NPBWR2P48146 333 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 RAB7AP51149 207 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 FUT6P51993 359 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 UBE2V2Q15819 145 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 SLC25A26Q70HW3 274 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 TGIF2LXQ8IUE1 241 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 CPOQ8IVL8 374 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 FAM58AQ8N1B3 248 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 BBS1Q8NFJ9 593 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 ASB17Q8WXJ9 295 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 HRASLS5Q96KN8 279 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 NIPSNAP1Q9BPW8 284 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 MOB1AQ9H8S9 216 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 RBFOX1Q9NWB1 397 aaKnown RBP6.56□□□□□ -1.36
SCFD1-202ENST00000396629 COPS3Q9UNS2 423 aa6.56□□□□□ -1.36
SCFD1-202ENST00000396629 ZNF729A6NN14 1252 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-202ENST00000396629 LOC110117498-PIK3R3F6TDL0 507 aa6.55□□□□□ -1.36
SCFD1-202ENST00000396629 I3L521 148 aa6.55□□□□□ -1.36
SCFD1-202ENST00000396629 CGB3P0DN86 165 aa6.55□□□□□ -1.36
SCFD1-202ENST00000396629 CGB7P0DN87 165 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms