RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CRYBB2P43320 205 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 MESTQ5EB52 335 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 OR2H1Q9GZK4 316 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 CDC42EP2O14613 210 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 HSBP1O75506 76 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 COX6B1P14854 86 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 GALP22466 123 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 LSM6P62312 80 aaKnown RBP9.16□□□□□ -0.94
COL4A6-203ENST00000394872 ATG4DQ86TL0 474 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-203ENST00000394872 CCDC190Q86UF4 302 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 IFT22Q9H7X7 185 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 C1QL3Q5VWW1 255 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 DYNLRB2Q8TF09 96 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 R3HDM4Q96D70 268 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 MS4A5Q9H3V2 200 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 CA10Q9NS85 328 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 SEMA7AO75326 666 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 GALR1P47211 349 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 GUK1Q16774 197 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 GGNBP1Q5YKI7 109 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 RNASEKQ6P5S7 137 aaKnown RBP9.16□□□□□ -0.94
COL4A6-203ENST00000394872 TMEM88Q6PEY1 159 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 COMMD1Q8N668 190 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 OR2M3Q8NG83 312 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 SLC25A40Q8TBP6 338 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 GMPPAQ96IJ6 420 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-203ENST00000394872 ABHD14AQ9BUJ0 271 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 ZNF385DQ9H6B1 395 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 WDR54Q9H977 334 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 SH2D2AQ9NP31 389 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 MTFP1Q9UDX5 166 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 LIFP15018 202 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 ID4P47928 161 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 HLXQ14774 488 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-203ENST00000394872 CTF1Q16619 201 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 C19orf35Q6ZS72 473 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 TTTY12Q9BZ98 90 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 SPINK4O60575 86 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 HTN1P15515 57 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 FGF9P31371 208 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-203ENST00000394872 PSG6Q00889 435 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 PMS2CLQ68D20 193 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 UCN2Q96RP3 112 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 GPR27Q9NS67 375 aa9.16□□□□□ -0.94
COL4A6-203ENST00000394872 FAM24AA6NFZ4 105 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 GNG7O60262 68 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 PNLIPP16233 465 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 ISXQ2M1V0 245 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 ZNF770Q6IQ21 691 aaPredicted RBP9.15□□□□□ -0.94
COL4A6-203ENST00000394872 CD300LDQ6UXZ3 194 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 TBC1D26Q86UD7 250 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 LILRB1Q8NHL6 650 aaPredicted RBP9.15□□□□□ -0.94
COL4A6-203ENST00000394872 FGF11Q92914 225 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 WDR13Q9H1Z4 485 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 INSIG2Q9Y5U4 225 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 IGKV3-7A0A075B6H7 116 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 ZNF737O75373 536 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 CD160O95971 181 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 SCGB1C2P0DMR2 95 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 ACP1P24666 158 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 CDC34P49427 236 aaPredicted RBP9.15□□□□□ -0.94
COL4A6-203ENST00000394872 TMPRSS3P57727 454 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 COL19A1Q14993 1142 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 AANATQ16613 207 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 RBM14Q96PK6 669 aaKnown RBP9.15□□□□□ -0.94
COL4A6-203ENST00000394872 KCNK15Q9H427 330 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 ZMAT5Q9UDW3 170 aaKnown RBP9.15□□□□□ -0.94
COL4A6-203ENST00000394872 PCOLCE2Q9UKZ9 415 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 STARD10Q9Y365 291 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 DHRS2Q13268 280 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 ZBTB37Q5TC79 503 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 GTF2H5Q6ZYL4 71 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 ZNF561Q8N587 486 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 GVQW1Q8N7I0 195 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 ATP5SQ99766 215 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 TMUB1Q9BVT8 246 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 MRM2Q9UI43 246 aaKnown RBP9.15□□□□□ -0.94
COL4A6-203ENST00000394872 MAP1LC3B2A6NCE7 125 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 SCAND1P57086 179 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 RAB32Q13637 225 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 INO80CQ6PI98 192 aaPredicted RBP9.15□□□□□ -0.94
COL4A6-203ENST00000394872 LIAT1Q6ZQX7 453 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 KLHDC1Q8N7A1 406 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 MAP6Q96JE9 813 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 MAP1LC3BQ9GZQ8 125 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 FLRT3Q9NZU0 649 aa9.15□□□□□ -0.94
COL4A6-203ENST00000394872 J3KRW8 73 aa9.15□□□□□ -0.95
COL4A6-203ENST00000394872 FTH1P19P0C7X4 201 aa9.15□□□□□ -0.95
COL4A6-203ENST00000394872 PMELP40967 661 aa9.15□□□□□ -0.95
COL4A6-203ENST00000394872 CD200P41217 278 aa9.15□□□□□ -0.95
COL4A6-203ENST00000394872 IL13RA2Q14627 380 aa9.15□□□□□ -0.95
COL4A6-203ENST00000394872 VAMP3Q15836 100 aa9.15□□□□□ -0.95
COL4A6-203ENST00000394872 C17orf47Q8NEP4 570 aa9.15□□□□□ -0.95
COL4A6-203ENST00000394872 MMP26Q9NRE1 261 aa9.15□□□□□ -0.95
COL4A6-203ENST00000394872 ABCA3Q99758 1704 aa9.15□□□□□ -0.95
COL4A6-203ENST00000394872 GEMIN2O14893 280 aaKnown RBP9.14□□□□□ -0.95
COL4A6-203ENST00000394872 TO15178 435 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 ZFP36L2P47974 494 aaKnown RBP9.14□□□□□ -0.95
COL4A6-203ENST00000394872 RPEL1Q2QD12 228 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 FOXB2Q5VYV0 432 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms