RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 SLC33A1O00400 549 aaPredicted RBP9.55□□□□□ -0.88
TCOF1-203ENST00000394269 MSTNO14793 375 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 FPR2P25090 351 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 SUPT4H1P63272 117 aaKnown RBP9.55□□□□□ -0.88
TCOF1-203ENST00000394269 KRTAP27-1Q3LI81 207 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 OR11L1Q8NGX0 322 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 SPSB4Q96A44 273 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF75AQ96N20 296 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 OBP2BQ9NPH6 170 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 UFSP2Q9NUQ7 469 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 NECAP2Q9NVZ3 263 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 OR14J1Q9UGF5 321 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF891A8MT65 544 aaPredicted RBP9.55□□□□□ -0.88
TCOF1-203ENST00000394269 SFT2D2O95562 160 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF728P0DKX0 622 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 MRPL49Q13405 166 aaKnown RBP9.55□□□□□ -0.88
TCOF1-203ENST00000394269 ZMYND11Q15326 602 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 MPPED2Q15777 294 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 NRN1LQ496H8 165 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 MEX3BQ6ZN04 569 aaKnown RBP9.55□□□□□ -0.88
TCOF1-203ENST00000394269 SGPP2Q8IWX5 399 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 SNIP1Q8TAD8 396 aaKnown RBP9.55□□□□□ -0.88
TCOF1-203ENST00000394269 SECTM1Q8WVN6 248 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 OR10C1Q96KK4 312 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 SCNM1Q9BWG6 230 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF286AQ9HBT8 521 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 C12orf4Q9NQ89 552 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF71Q9NQZ8 489 aaPredicted RBP9.55□□□□□ -0.88
TCOF1-203ENST00000394269 RYDENQ9NUL5 291 aaKnown RBP9.55□□□□□ -0.88
TCOF1-203ENST00000394269 OSGIN2Q9Y236 505 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 TNRC6AQ8NDV7 1962 aaKnown RBP9.55□□□□□ -0.88
TCOF1-203ENST00000394269 PKDREJQ9NTG1 2253 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 CDIPTO14735 213 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 RLN2P04090 185 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 CEACAM1P13688 526 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 NAT1P18440 290 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 PSMB6P28072 239 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 TAGLNQ01995 201 aaKnown RBP9.54□□□□□ -0.88
TCOF1-203ENST00000394269 FGL1Q08830 312 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 TFAP2EQ6VUC0 442 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 RPRMLQ8N4K4 120 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF610Q8N9Z0 462 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 SLC25A40Q8TBP6 338 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 COQ3Q9NZJ6 369 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 TINAGQ9UJW2 476 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 CCDC168Q8NDH2 2452 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 ESPL1Q14674 2120 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 A6NLC8 198 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 HERV-K104P61576 105 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 PPP1CBP62140 327 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 VHLLQ6RSH7 139 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 PXT1Q8NFP0 134 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 PQLC2LA1A4F0 135 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 HMSDA8MTL9 139 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 SCTP09683 121 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 PTGER4P35408 488 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 GLP1RP43220 463 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 TMEM200AQ86VY9 491 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 ZGRF1Q86YA3 2104 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 LRRK2Q5S007 2527 aa9.54□□□□□ -0.88
TCOF1-203ENST00000394269 A0A0B4J2A0 478 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 SIRPB1O00241 398 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 TNFSF12O43508 249 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 IFNA2P01563 188 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 IL2RAP01589 272 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 PDGFAP04085 211 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 KIR2DL2P43627 348 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-203ENST00000394269 IAH1Q2TAA2 248 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-203ENST00000394269 Q6ZSR3 168 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 RTN4IP1Q8WWV3 396 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-203ENST00000394269 CXorf58Q96LI9 332 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 MSL2Q9HCI7 577 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 SHPKQ9UHJ6 478 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 DUSP13Q9UII6 198 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 LSM5Q9Y4Y9 91 aaKnown RBP9.53□□□□□ -0.88
TCOF1-203ENST00000394269 H0YL77 283 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF250P15622 560 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF169Q14929 603 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-203ENST00000394269 RTL6Q6ICC9 239 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 CLEC9AQ6UXN8 241 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 PLCE1Q9P212 2302 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 LRP3O75074 770 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 WDR1O75083 606 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 TFF1P04155 84 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 RCC1P18754 421 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-203ENST00000394269 GNG3P63215 75 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 RAB32Q13637 225 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF826PQ6ZT77 177 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 OR5A2Q8NGI9 324 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 NARFLQ9H6Q4 476 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 KCNIP3Q9Y2W7 256 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF175Q9Y473 711 aa9.53□□□□□ -0.88
TCOF1-203ENST00000394269 RBM7Q9Y580 266 aaKnown RBP9.53□□□□□ -0.88
TCOF1-203ENST00000394269 hCG_1807616A0A1W2PRN6 198 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 CRHP06850 196 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 OR5AC1P0C628 307 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 AADACP22760 399 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 LPCAT3Q6P1A2 487 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 FAHD2BQ6P2I3 314 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-203ENST00000394269 LHFPL1Q86WI0 220 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms