RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PMELP40967 661 aa16.27■□□□□ 0.2
CBX1-202ENST00000393408 ABLIM2Q6H8Q1 611 aa16.27■□□□□ 0.2
CBX1-202ENST00000393408 HSD17B11Q8NBQ5 300 aa16.27■□□□□ 0.2
CBX1-202ENST00000393408 EIF5A2Q9GZV4 153 aaKnown RBP16.27■□□□□ 0.2
CBX1-202ENST00000393408 ZNF816-ZNF321PA0A0X1KG74 233 aa16.27■□□□□ 0.19
CBX1-202ENST00000393408 PPYP01298 95 aa16.27■□□□□ 0.19
CBX1-202ENST00000393408 SNRNP70P08621 437 aaKnown RBP16.27■□□□□ 0.19
CBX1-202ENST00000393408 FUT3P21217 361 aa16.27■□□□□ 0.19
CBX1-202ENST00000393408 NOVA1P51513 510 aaKnown RBP16.27■□□□□ 0.19
CBX1-202ENST00000393408 RNF212Q495C1 297 aa16.27■□□□□ 0.19
CBX1-202ENST00000393408 CALHM1Q8IU99 346 aa16.27■□□□□ 0.19
CBX1-202ENST00000393408 SGCZQ96LD1 299 aa16.27■□□□□ 0.19
CBX1-202ENST00000393408 C11orf1Q9H5F2 150 aa16.27■□□□□ 0.19
CBX1-202ENST00000393408 PRH1P02810 166 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 EDN3P14138 238 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 RIPPLY2Q5TAB7 128 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 MEX3BQ6ZN04 569 aaKnown RBP16.26■□□□□ 0.19
CBX1-202ENST00000393408 BOD1Q96IK1 185 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 ADGRG7Q96K78 797 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 TECTBQ96PL2 329 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 ZNF442Q9H7R0 627 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 TUBA4BQ9H853 241 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 PILRBQ9UKJ0 227 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 C1orf196B1AJZ1 125 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 MPPED1O15442 326 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 EIF3GO75821 320 aaKnown RBP eCLIP16.26■□□□□ 0.19
CBX1-202ENST00000393408 MT-ND4LP03901 98 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 PCBD1P61457 104 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 SNRPEP62304 92 aaKnown RBP16.26■□□□□ 0.19
CBX1-202ENST00000393408 EWSR1Q01844 656 aaKnown RBP eCLIP16.26■□□□□ 0.19
CBX1-202ENST00000393408 TRIM61Q5EBN2 209 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 IP6K3Q96PC2 410 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 GPR35Q9HC97 309 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 PLSCR2Q9NRY7 297 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 P4HTMQ9NXG6 502 aa16.26■□□□□ 0.19
CBX1-202ENST00000393408 WDFY3Q8IZQ1 3526 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 C3orf85A0A1B0GTC6 90 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 ZNF587BE7ETH6 402 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 GNMTQ14749 295 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 IGSF11Q5DX21 431 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 OR10D3Q8NH80 312 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 USB1Q9BQ65 265 aaKnown RBP16.25■□□□□ 0.19
CBX1-202ENST00000393408 IFT22Q9H7X7 185 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 OR7C1O76099 320 aaPredicted RBP16.25■□□□□ 0.19
CBX1-202ENST00000393408 P04436 131 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 RFPL3SP0C7P2 107 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 ZNF44P15621 663 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 FOLR3P41439 243 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 NPBWR2P48146 333 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.25■□□□□ 0.19
CBX1-202ENST00000393408 ZNF611Q8N823 705 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 OR2V1Q8NHB1 315 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 SLC39A7Q92504 469 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 SPSB4Q96A44 273 aa16.25■□□□□ 0.19
CBX1-202ENST00000393408 NKX2-6A6NCS4 301 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 TRDCB7Z8K6 153 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 K7N7A8 449 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 CDS2O95674 445 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 MMP7P09237 267 aaPredicted RBP16.24■□□□□ 0.19
CBX1-202ENST00000393408 B2MP61769 119 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 SRPXP78539 464 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 PMS2CLQ68D20 193 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 SLC25A26Q70HW3 274 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 FAM185AQ8N0U4 392 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 TAAR9Q96RI9 348 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 TMEM222Q9H0R3 208 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 C5orf52A6NGY3 159 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 LRRC3CA6NJW4 275 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 UMAD1C9J7I0 102 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 M0R036 132 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 NTN3O00634 580 aaPredicted RBP16.24■□□□□ 0.19
CBX1-202ENST00000393408 ACAA1P09110 424 aaPredicted RBP16.24■□□□□ 0.19
CBX1-202ENST00000393408 AGAP20933 346 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 CLDN15P56746 228 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 CDCP2Q5VXM1 449 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 TMEM182Q6ZP80 229 aaPredicted RBP16.24■□□□□ 0.19
CBX1-202ENST00000393408 OR2C3Q8N628 320 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 POM121Q96HA1 1249 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 C20orf24Q9BUV8 137 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 C1QTNF5Q9BXJ0 243 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 PARPBPQ9NWS1 579 aa16.24■□□□□ 0.19
CBX1-202ENST00000393408 MED19A0JLT2 244 aaPredicted RBP16.23■□□□□ 0.19
CBX1-202ENST00000393408 GNRHRP30968 328 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 PPP1CCP36873 323 aaKnown RBP16.23■□□□□ 0.19
CBX1-202ENST00000393408 ASCL1P50553 236 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 S100A12P80511 92 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 ZFP36L1Q07352 338 aaKnown RBP16.23■□□□□ 0.19
CBX1-202ENST00000393408 BATF2Q8N1L9 274 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 Q8NFD4 153 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 FAM213BQ8TBF2 198 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 PBDC1Q9BVG4 233 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 SLC35B3Q9H1N7 401 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 FBXO7Q9Y3I1 522 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 SIT1Q9Y3P8 196 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 A0A1B0GW64 132 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 A0A1W2PPH5 198 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 FAM24AA6NFZ4 105 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 A6NLC8 198 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 RPL36A-HNRNPH2H7BZ11 118 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 HOXB1P14653 301 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms