RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 ZNF593O00488 134 aaPredicted RBP6.19□□□□□ -1.42
CASP4-201ENST00000393150 EDF1O60869 148 aaKnown RBP6.19□□□□□ -1.42
CASP4-201ENST00000393150 GMNNO75496 209 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 TFF1P04155 84 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 H2BFMP0C1H6 154 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 OR8U8P0C7N1 319 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 BTF3P20290 206 aaKnown RBP6.19□□□□□ -1.42
CASP4-201ENST00000393150 CD24P25063 80 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 ZNF273Q14593 569 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 KPNB1Q14974 876 aaKnown RBP6.19□□□□□ -1.42
CASP4-201ENST00000393150 CEACAM21Q3KPI0 293 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 CD300EQ496F6 205 aaPredicted RBP6.19□□□□□ -1.42
CASP4-201ENST00000393150 SLX4IPQ5VYV7 408 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 TMEM65Q6PI78 240 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 HAGHLQ6PII5 290 aaPredicted RBP6.19□□□□□ -1.42
CASP4-201ENST00000393150 C10orf99Q6UWK7 81 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 SLC35E3Q7Z769 313 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 COMMD2Q86X83 199 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 DRAM1Q8N682 238 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 OR2T12Q8NG77 320 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 DUX3Q96PT4 197 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 KRT84Q9NSB2 600 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 DNAJC27Q9NZQ0 273 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 CD300AQ9UGN4 299 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 ZNF222Q9UK12 451 aa6.19□□□□□ -1.42
CASP4-201ENST00000393150 A0A1W2PRQ8 180 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 ARRDC5A6NEK1 342 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 TVP23AA6NH52 213 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 J3KTA2 159 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 K7N7A8 449 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 AP4M1O00189 453 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 CDX1P47902 265 aaPredicted RBP6.18□□□□□ -1.42
CASP4-201ENST00000393150 ZNF121P58317 390 aaPredicted RBP6.18□□□□□ -1.42
CASP4-201ENST00000393150 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.18□□□□□ -1.42
CASP4-201ENST00000393150 DGCR6Q14129 220 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 ZNF684Q5T5D7 378 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 PLCXD3Q63HM9 321 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 SHFQ7M4L6 423 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 SLC15A3Q8IY34 581 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 ABHD12Q8N2K0 398 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 ST6GALNAC6Q969X2 333 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 RPEQ96AT9 228 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 C7orf26Q96N11 449 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 SIKE1Q9BRV8 207 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 WDR12Q9GZL7 423 aaKnown RBP6.18□□□□□ -1.42
CASP4-201ENST00000393150 OR51I2Q9H344 312 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 GAL3ST2Q9H3Q3 398 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 MRPL22Q9NWU5 206 aaKnown RBP6.18□□□□□ -1.42
CASP4-201ENST00000393150 SLC22A13Q9Y226 551 aa6.18□□□□□ -1.42
CASP4-201ENST00000393150 CSMD3Q7Z407 3707 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 SH2D7A6NKC9 451 aaPredicted RBP6.17□□□□□ -1.42
CASP4-201ENST00000393150 CCRL2O00421 344 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 FGF16O43320 207 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 CCDC22O60826 627 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 SAP30O75446 220 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 CIB2O75838 187 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 SPDEFO95238 335 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 LY6G6CO95867 125 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 OR5H8P0DN80 308 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 GP9P14770 177 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 ATP6V1B1P15313 513 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 CALB2P22676 271 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 PYCR1P32322 319 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 HAAOP46952 286 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 CRYBA2P53672 197 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 RPS7P62081 194 aaKnown RBP6.17□□□□□ -1.42
CASP4-201ENST00000393150 BDH1Q02338 343 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 RIPPLY1Q0D2K3 151 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 FOXE3Q13461 319 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 GPR50Q13585 617 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 RBM39Q14498 530 aaKnown RBP6.17□□□□□ -1.42
CASP4-201ENST00000393150 EDDM3AQ14507 147 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 MAPRE2Q15555 327 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 SPATS1Q496A3 300 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 CEP78Q5JTW2 689 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 TEX30Q5JUR7 227 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 RPL13AP3Q6NVV1 102 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 MOB3CQ70IA8 216 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 STPG2Q8N412 459 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 CD177Q8N6Q3 437 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 POC1AQ8NBT0 407 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 OR11H1Q8NG94 326 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 OR6K6Q8NGW6 343 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 AQP3Q92482 292 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 MCUR1Q96AQ8 359 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 ZNF503Q96F45 646 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 NOL4LQ96MY1 436 aaPredicted RBP6.17□□□□□ -1.42
CASP4-201ENST00000393150 TM2D3Q9BRN9 247 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 VCXQ9H320 206 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 OR52D1Q9H346 318 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 TUBA4BQ9H853 241 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 DNAJB9Q9UBS3 223 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 AMMECR1Q9Y4X0 333 aaPredicted RBP6.17□□□□□ -1.42
CASP4-201ENST00000393150 LINC00312Q9Y6C7 94 aa6.17□□□□□ -1.42
CASP4-201ENST00000393150 TRGV10A0A0A0MS01 117 aa6.16□□□□□ -1.42
CASP4-201ENST00000393150 DHRS12A0PJE2 317 aa6.16□□□□□ -1.42
CASP4-201ENST00000393150 NCBP2LA6PVI3 153 aaKnown RBP6.16□□□□□ -1.42
CASP4-201ENST00000393150 FAM220BPB1ANY3 271 aa6.16□□□□□ -1.42
CASP4-201ENST00000393150 E2F6O75461 281 aa6.16□□□□□ -1.42
CASP4-201ENST00000393150 IFNGP01579 166 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms