RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 MDKP21741 143 aaPredicted RBP12.12□□□□□ -0.47
CCDC57-203ENST00000392343 HNRNPKP61978 463 aaKnown RBP eCLIP12.12□□□□□ -0.479e-8■■■■□ 24.3
CCDC57-203ENST00000392343 ARL6IP1Q15041 203 aa12.12□□□□□ -0.47
CCDC57-203ENST00000392343 KCNMB1Q16558 191 aa12.12□□□□□ -0.47
CCDC57-203ENST00000392343 KDF1Q8NAX2 398 aaPredicted RBP12.12□□□□□ -0.47
CCDC57-203ENST00000392343 SUCNR1Q9BXA5 334 aa12.12□□□□□ -0.47
CCDC57-203ENST00000392343 HSF4Q9ULV5 492 aa12.12□□□□□ -0.47
CCDC57-203ENST00000392343 ST3GAL6Q9Y274 331 aa12.12□□□□□ -0.47
CCDC57-203ENST00000392343 A0A0U1RQV5 110 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 CXorf65A6NEN9 183 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 ZNF729A6NN14 1252 aaPredicted RBP12.11□□□□□ -0.47
CCDC57-203ENST00000392343 CELA2AP08217 269 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 NKAIN1Q4KMZ8 207 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 FBXO46Q6PJ61 603 aaPredicted RBP12.11□□□□□ -0.47
CCDC57-203ENST00000392343 NAT6Q93015 286 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 NABP1Q96AH0 204 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 GLRX2Q9NS18 164 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 WRBO00258 174 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 HIST1H2BKO60814 126 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 IGLV3-19P01714 112 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 LCATP04180 440 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 HIST1H2BJP06899 126 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 SOD3P08294 240 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 SRP19P09132 144 aaKnown RBP12.11□□□□□ -0.47
CCDC57-203ENST00000392343 SPINK2P20155 84 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 HIST1H2BOP23527 126 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 CD27P26842 260 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 HIST1H2BBP33778 126 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 HIST1H2BDP58876 126 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 HIST1H2BCP62807 126 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 DEFA6Q01524 100 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 HIST2H2BEQ16778 126 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.11□□□□□ -0.47
CCDC57-203ENST00000392343 ZNF774Q6NX45 483 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 OR4D5Q8NGN0 318 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 OR14L1PQ8NHC6 308 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 HIST1H2BHQ93079 126 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 BORCS8Q96FH0 119 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 HIST1H2BNQ99877 126 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 HIST1H2BMQ99879 126 aa12.11□□□□□ -0.47
CCDC57-203ENST00000392343 C3orf85A0A1B0GTC6 90 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 PROB1E7EW31 1015 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 NKX2-1P43699 371 aaPredicted RBP12.1□□□□□ -0.47
CCDC57-203ENST00000392343 DYNLT3P51808 116 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 HERV-K104P61576 105 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 HIKESHIQ53FT3 197 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 RTL6Q6ICC9 239 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 FAM180AQ6UWF9 173 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 ZNF610Q8N9Z0 462 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 OR6C1Q96RD1 312 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 SYT3Q9BQG1 590 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 PRO1933Q9H354 126 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 ZNF442Q9H7R0 627 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 C2CD4DB7Z1M9 353 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 NPIPA2E9PIF3 369 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 NPIPA3F8WFD2 350 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 H3BP45 60 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 HSPB6O14558 160 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 DHHO43323 396 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 CTSSP25774 331 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 LSM6P62312 80 aaKnown RBP12.1□□□□□ -0.47
CCDC57-203ENST00000392343 SLC25A53Q5H9E4 307 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 UNQ6494/PRO21346Q6UXR6 183 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 C1QL4Q86Z23 238 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 TMEM123Q8N131 208 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 S100PBPQ96BU1 408 aa12.1□□□□□ -0.47
CCDC57-203ENST00000392343 UBE2J1Q9Y385 318 aaPredicted RBP12.1□□□□□ -0.47
CCDC57-203ENST00000392343 YKT6O15498 198 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 OR7C1O76099 320 aaPredicted RBP12.09□□□□□ -0.47
CCDC57-203ENST00000392343 TMEM50AO95807 157 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 RNF224P0DH78 156 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 ZNF154Q13106 437 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 ICAM4Q14773 271 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 SHBQ15464 509 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 TMEM252Q8N6L7 170 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 LFNGQ8NES3 379 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 RASL10BQ96S79 203 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 WSB1Q9Y6I7 421 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 ETV2O00321 342 aaPredicted RBP12.09□□□□□ -0.47
CCDC57-203ENST00000392343 ADAM20O43506 726 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 GATCO43716 136 aaKnown RBP12.09□□□□□ -0.47
CCDC57-203ENST00000392343 CA11O75493 328 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 PIAS2O75928 621 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 CD63P08962 238 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 MSX1P28360 303 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 TLE1Q04724 770 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 RAET1LQ5VY80 246 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 ZNF695Q8IW36 515 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 ULBP2Q9BZM5 246 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 ZNF286AQ9HBT8 521 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 TREM2Q9NZC2 230 aa12.09□□□□□ -0.47
CCDC57-203ENST00000392343 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.08□□□□□ -0.47
CCDC57-203ENST00000392343 MPPED1O15442 326 aa12.08□□□□□ -0.47
CCDC57-203ENST00000392343 GDF9O60383 454 aa12.08□□□□□ -0.47
CCDC57-203ENST00000392343 ZFAND5O76080 213 aa12.08□□□□□ -0.47
CCDC57-203ENST00000392343 PPYP01298 95 aa12.08□□□□□ -0.47
CCDC57-203ENST00000392343 FABP4P15090 132 aa12.08□□□□□ -0.47
CCDC57-203ENST00000392343 RBP2P50120 134 aa12.08□□□□□ -0.47
CCDC57-203ENST00000392343 RPL23AP62750 156 aaKnown RBP12.08□□□□□ -0.47
CCDC57-203ENST00000392343 VAMP2P63027 116 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms