RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 KCNJ8Q15842 424 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 IGFBP7Q16270 282 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 FAHD2BQ6P2I3 314 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 Q6ZR03 302 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 SLC25A42Q86VD7 318 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 MUC20Q8N307 709 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 ST6GALNAC3Q8NDV1 305 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZNF431Q8TF32 576 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 CAPSLQ8WWF8 208 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 DYRK2Q92630 601 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 FAHD2AQ96GK7 314 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZNF488Q96MN9 340 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 CXXC4Q9H2H0 198 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 EHFQ9NZC4 300 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 MEMO1Q9Y316 297 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 PGA5P0DJD9 388 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 CASP6P55212 293 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 IKZF1Q13422 519 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 ALKBH2Q6NS38 261 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 C22orf34Q6ZV56 151 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 OR13G1Q8NGZ3 307 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 NRIP2Q9BQI9 281 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZNF436Q9C0F3 470 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 TLNRD1Q9H1K6 362 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 FN3KRPQ9HA64 309 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 FZR1Q9UM11 496 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 OSGIN2Q9Y236 505 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 CDIPTO14735 213 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 GLAP06280 429 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 GZMKP49863 264 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 SRSF7Q16629 238 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 GTF3AQ92664 365 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZNF486Q96H40 463 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 SCGB3A2Q96PL1 93 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 SHANK1Q9Y566 2161 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 TRGV8A0A0C4DH27 118 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 SDCBPO00560 298 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 FABP7O15540 132 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 NOS1APO75052 506 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 IGHV3-13P01766 116 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 SFTPCP11686 197 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 FPR2P25090 351 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 CD40P25942 277 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 ERP29P30040 261 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 CA7P43166 264 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 RPS23P62266 143 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 MZT1Q08AG7 82 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 MSMPQ1L6U9 139 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 AADACL3Q5VUY0 350 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 Q6ZS49 121 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 PEG10Q86TG7 708 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 MARCH1Q8TCQ1 289 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZNF286AQ9HBT8 521 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 MGAT4CQ9UBM8 478 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 GPR132Q9UNW8 380 aa9.72□□□□□ -0.85
SMARCAL1-203ENST00000392128 MCRIP1C9JLW8 97 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 NAPSAO96009 420 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 GRPP07492 148 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 ECI1P42126 302 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 TAS2R31P59538 309 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 DHRS2Q13268 280 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 SURF2Q15527 256 aaPredicted RBP9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 Q6ZPA2 131 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 C17orf107Q6ZR85 190 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 C11orf53Q8IXP5 236 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 SUMF2Q8NBJ7 301 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 POC1AQ8NBT0 407 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 TMEM171Q8WVE6 324 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 HES4Q9HCC6 221 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 MSL2Q9HCI7 577 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 DLL4Q9NR61 685 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 NECAP2Q9NVZ3 263 aa9.71□□□□□ -0.85
SMARCAL1-203ENST00000392128 IGLV3-9A0A075B6K5 115 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 ATP6V1G2-DDX39BF2Z307 99 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 F5H5P2 479 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 ZBTB25P24278 435 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 DUSP1P28562 367 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 UBE2MP61081 183 aaKnown RBP9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 ZNF146Q15072 292 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 ZNF660Q6AZW8 331 aaPredicted RBP9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 Q6P435 159 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 TMEM108Q6UXF1 575 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 LYG2Q86SG7 212 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 TMEM185AQ8NFB2 350 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 OR2AK2Q8NG84 335 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 HYLS1Q96M11 299 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 RIMS4Q9H426 269 aaPredicted RBP9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 RANBP3Q9H6Z4 567 aaPredicted RBP9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 CA10Q9NS85 328 aa9.71□□□□□ -0.86
SMARCAL1-203ENST00000392128 TRAV24A0A0B4J272 114 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 FAM221AA4D161 298 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 ANKRD34BA5PLL1 514 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 SMLR1H3BR10 107 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 HLA-AP01891 365 aaKnown RBP9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 GIPP09681 153 aaPredicted RBP9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 OR5H8P0DN80 308 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 PPP3CBP16298 524 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 PTAFRP25105 342 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 NPY4RP50391 375 aa9.7□□□□□ -0.86
SMARCAL1-203ENST00000392128 KLF3P57682 345 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms