RNA–Protein interactions for RNA: ENST00000392004.7

COL6A3-205, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best) BASIC

Gene COL6A3, Length 4,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-205ENST00000392004 NANOS3P60323 173 aaKnown RBP8.92□□□□□ -0.98
COL6A3-205ENST00000392004 LRRC37A5PQ49AS3 106 aa8.92□□□□□ -0.98
COL6A3-205ENST00000392004 C9orf152Q5JTZ5 239 aa8.92□□□□□ -0.98
COL6A3-205ENST00000392004 ST7LQ8TDW4 575 aa8.92□□□□□ -0.98
COL6A3-205ENST00000392004 WDR89Q96FK6 387 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-205ENST00000392004 BOD1Q96IK1 185 aa8.92□□□□□ -0.98
COL6A3-205ENST00000392004 VKORC1Q9BQB6 163 aa8.92□□□□□ -0.98
COL6A3-205ENST00000392004 MZT1Q08AG7 82 aa8.92□□□□□ -0.98
COL6A3-205ENST00000392004 OR2B11Q5JQS5 317 aa8.92□□□□□ -0.98
COL6A3-205ENST00000392004 MUC15Q8N387 334 aa8.92□□□□□ -0.98
COL6A3-205ENST00000392004 PIGMQ9H3S5 423 aa8.92□□□□□ -0.98
COL6A3-205ENST00000392004 ZDHHC11Q9H8X9 412 aa8.92□□□□□ -0.98
COL6A3-205ENST00000392004 EDARQ9UNE0 448 aa8.92□□□□□ -0.98
COL6A3-205ENST00000392004 A0A087WV48 116 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 C5orf51A6NDU8 294 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 OR2AT4A6NND4 320 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 DEFB108AA8MXU0 73 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 AKAIN1P0CW23 69 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 TNFRSF1AP19438 455 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 MICBQ29980 383 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 H3F3CQ6NXT2 135 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 C12orf45Q8N5I9 185 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-205ENST00000392004 LINC00469Q8N7U9 141 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 NUDCD2Q8WVJ2 157 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 HAVCR1Q96D42 359 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 STARD4Q96DR4 205 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 SLC5A7Q9GZV3 580 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 RAB1BQ9H0U4 201 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 RNF150Q9ULK6 438 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 AMDHD2Q9Y303 409 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 ETV7Q9Y603 341 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 DENND4AQ7Z401 1863 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 DMXL2Q8TDJ6 3036 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 IGLV1-36A0A0B4J1U3 117 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 TMEM8BA6NDV4 472 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 F8W036 122 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 SDCBPO00560 298 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-205ENST00000392004 CST2P09228 141 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 VSIG10L2P0DP72 767 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 COX7A1P24310 79 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 RBMXP38159 391 aaKnown RBP8.91□□□□□ -0.98
COL6A3-205ENST00000392004 LSM6P62312 80 aaKnown RBP8.91□□□□□ -0.98
COL6A3-205ENST00000392004 OIT3Q8WWZ8 545 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 C22orf15Q8WYQ4 148 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 NEUROG1Q92886 237 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 WFIKKN1Q96NZ8 548 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 HAO2Q9NYQ3 351 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 ARFGEF3Q5TH69 2177 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 RFPL4AA6NLU0 287 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 ZNF716A6NP11 495 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 RFPL4AL1F8VTS6 287 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 GLSO94925 669 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-205ENST00000392004 LUMP51884 338 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-205ENST00000392004 KISS1Q15726 138 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 MPPED2Q15777 294 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 TMEM88Q6PEY1 159 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 SLC25A47Q6Q0C1 308 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 ZNF573Q86YE8 665 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 MUC20Q8N307 709 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-205ENST00000392004 SECTM1Q8WVN6 248 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 SLC25A38Q96DW6 304 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 GFOD1Q9NXC2 390 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 OR5V1Q9UGF6 321 aa8.91□□□□□ -0.98
COL6A3-205ENST00000392004 F5H0A9 414 aaPredicted RBP8.9□□□□□ -0.98
COL6A3-205ENST00000392004 TMEM127O75204 238 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 CLDN14O95500 239 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 SERPINF1P36955 418 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 H2BFSP57053 126 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 GNG3P63215 75 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 BEX5Q5H9J7 111 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 ZIC4Q8N9L1 334 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 OR4C16Q8NGL9 310 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 WNT5BQ9H1J7 359 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 DHRS3O75911 302 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 OR3A4PP47883 348 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 ASCL1P50553 236 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 BLOC1S1P78537 153 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 ZP4Q12836 540 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 C1orf87Q8N0U7 546 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 CPEB3Q8NE35 698 aaKnown RBP8.9□□□□□ -0.98
COL6A3-205ENST00000392004 THAP6Q8TBB0 222 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 ITLN1Q8WWA0 313 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 ASB13Q8WXK3 278 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 METTL8Q9H825 291 aaKnown RBP8.9□□□□□ -0.98
COL6A3-205ENST00000392004 TREM1Q9NP99 234 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 ONECUT1Q9UBC0 465 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 CYB5R1Q9UHQ9 305 aa8.9□□□□□ -0.98
COL6A3-205ENST00000392004 NOP16Q9Y3C1 178 aaKnown RBP8.9□□□□□ -0.98
COL6A3-205ENST00000392004 NPIPB7O75200 414 aa8.9□□□□□ -0.99
COL6A3-205ENST00000392004 ACTL6BO94805 426 aa8.9□□□□□ -0.99
COL6A3-205ENST00000392004 RAB13P51153 203 aa8.9□□□□□ -0.99
COL6A3-205ENST00000392004 B3GALT5-AS1P59052 145 aa8.9□□□□□ -0.99
COL6A3-205ENST00000392004 HIST2H2BCQ6DN03 193 aa8.9□□□□□ -0.99
COL6A3-205ENST00000392004 SEZ6L2Q6UXD5 910 aa8.9□□□□□ -0.99
COL6A3-205ENST00000392004 FAM122BQ7Z309 247 aa8.9□□□□□ -0.99
COL6A3-205ENST00000392004 INO80EQ8NBZ0 244 aaPredicted RBP8.9□□□□□ -0.99
COL6A3-205ENST00000392004 OR51S1Q8NGJ8 323 aa8.9□□□□□ -0.99
COL6A3-205ENST00000392004 OR5H2Q8NGV7 314 aa8.9□□□□□ -0.99
COL6A3-205ENST00000392004 KCNG3Q8TAE7 436 aa8.9□□□□□ -0.99
COL6A3-205ENST00000392004 ADAT3Q96EY9 351 aaPredicted RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms