RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 GALNT10Q86SR1 603 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 CYP4Z1Q86W10 505 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 MSRB3Q8IXL7 192 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 CA13Q8N1Q1 262 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 ARHGAP18Q8N392 663 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 OR8K1Q8NGG5 319 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 OR6K3Q8NGY3 331 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 SCGB1C1Q8TD33 95 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 ANAPC13Q9BS18 74 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 TMEM106BQ9NUM4 274 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 PSME2Q9UL46 239 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 C14orf166Q9Y224 244 aaKnown RBP1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 SLC22A14Q9Y267 594 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 LTBP2Q14767 1821 aa1.1□□□□□ -2.23
RNU6-550P-201ENST00000391057 COL5A3P25940 1745 aaPredicted RBP1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 IGKV1D-37A0A075B6S9 117 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 TRGV4A0A0C4DH28 118 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 ANKRD20A5PA0PJZ0 165 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 SOD3P08294 240 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 CECR9P0C854 216 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 CGB3P0DN86 165 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 CGB7P0DN87 165 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 LIPCP11150 499 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 SRMP19623 302 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 PRTN3P24158 256 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 HTR2CP28335 458 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 DEFB103AP81534 67 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 TNXAQ16473 311 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 TAL2Q16559 108 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 HSP90AA4PQ58FG1 418 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 OR10D4PQ8NGN7 298 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 TWIST2Q8WVJ9 160 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 FAM131CQ96AQ9 280 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 ZNF707Q96C28 371 aaPredicted RBP1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 CHRNA10Q9GZZ6 450 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 LRRC19Q9H756 370 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 TUBA4BQ9H853 241 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 PLEKHA1Q9HB21 404 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 DNAJC27Q9NZQ0 273 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 OR5V1Q9UGF6 321 aa1.09□□□□□ -2.23
RNU6-550P-201ENST00000391057 AQRO60306 1485 aaKnown RBP eCLIP1.09□□□□□ -2.24
RNU6-550P-201ENST00000391057 TMEM131Q92545 1883 aa1.09□□□□□ -2.24
RNU6-550P-201ENST00000391057 NEURL4Q96JN8 1562 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 A0A0J9YYE9 177 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 CRTAPO75718 401 aaPredicted RBP1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 PDYNP01213 254 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 TRBC1P01850 177 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 OPN1SWP03999 348 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 P0DMU3 169 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 FAM231AP0DMU4 169 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 FAM231CP0DMU5 169 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 CTLA4P16410 223 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 ZNF22P17026 224 aaPredicted RBP1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 PRKACAP17612 351 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 CNTFRP26992 372 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 ELK4P28324 431 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 DYNC1I2Q13409 638 aaKnown RBP1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 WDR43Q15061 677 aaKnown RBP eCLIP1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 PYCR3Q53H96 274 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 ACTBL2Q562R1 376 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 GLYATQ6IB77 296 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 NOXRED1Q6NXP6 359 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 ERICH5Q6P6B1 374 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 Q6ZS52 159 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 GAPTQ8N292 157 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 OR2M3Q8NG83 312 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 OR51L1Q8NGJ5 315 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 OR51Q1Q8NH59 317 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 DOK4Q8TEW6 326 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 KIAA1143Q96AT1 154 aaPredicted RBP1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 ULBP1Q9BZM6 244 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 ZNF436Q9C0F3 470 aaPredicted RBP1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 NCOR1P1Q9H4R4 102 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 PRORYQ9H606 182 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 RBM12B-AS1Q9P1G2 102 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 V9GYY9 64 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 PLXNB3Q9ULL4 1909 aa1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 COL11A1P12107 1806 aaPredicted RBP1.08□□□□□ -2.24
RNU6-550P-201ENST00000391057 NOS1P29475 1434 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 TRBV24-1A0A075B6N3 115 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 GOLGA6L7A0A1B0GV03 622 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 RBFOX3A6NFN3 312 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 TVP23AA6NH52 213 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 POP7O75817 140 aaKnown RBP1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 GPR75O95800 540 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 MBP02144 154 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 SFTPCP11686 197 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 XKP51811 444 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 CASP8Q14790 479 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 CEACAM16Q2WEN9 425 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 PCOTHQ58A44 107 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 ASCL4Q6XD76 172 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 ZNF567Q8N184 647 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 ATPAF2Q8N5M1 289 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 MFSD8Q8NHS3 518 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 LMX1AQ8TE12 382 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 CCL17Q92583 94 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 MAL2Q969L2 176 aa1.07□□□□□ -2.24
RNU6-550P-201ENST00000391057 FMC1Q96HJ9 113 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms