RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 TTC4O95801 387 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 CD160O95971 181 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 RALBP11234 206 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 NQO1P15559 274 aaKnown RBP-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 LPAR6P43657 344 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 SURF2Q15527 256 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 TMEM241Q24JQ0 296 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 UBE2NLQ5JXB2 153 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 SLC8B1Q6J4K2 584 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ZNF773Q6PK81 442 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 AGTRAPQ6RW13 159 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 LINC00337Q8N6G1 96 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 TTC29Q8NA56 475 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ZNF439Q8NDP4 499 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ACMSDQ8TDX5 336 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 GTF2H4Q92759 462 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 Q96M85 177 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ADAT1Q9BUB4 502 aaKnown RBP-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 TMCC3Q9ULS5 477 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 C14orf166Q9Y224 244 aaKnown RBP-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 LINC00588Q9Y4M8 146 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ZNF706Q9Y5V0 76 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ALPK2Q86TB3 2170 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 TRPM6Q9BX84 2022 aa-0.45□□□□□ -2.48
RNU6-1228P-201ENST00000391014 HRNRQ86YZ3 2850 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 TNCP24821 2201 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ZFYVE26Q68DK2 2539 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 TRAV8-4A0A0B4J246 113 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 C2orf74A8MZ97 194 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 EIF3HO15372 352 aaKnown RBP eCLIP-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 DENRO43583 198 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 MTX2O75431 263 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 OR2J3O76001 311 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 SOX14O95416 240 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 P01737 135 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 MYL2P10916 166 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 GLRA2P23416 452 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 CTBP2P56545 445 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 OR2B6P58173 313 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 POLR2FP61218 127 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 MGAT3Q09327 533 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 SKP2Q13309 424 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 HTR4Q13639 388 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 SSX2Q16385 188 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 HNRNPA1L2Q32P51 320 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 CLLU1OSQ5K130 101 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 RNASEKQ6P5S7 137 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 LINC00596Q86U02 117 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 CYP4Z2PQ8N1L4 340 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ADTRPQ96IZ2 230 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 XPO6Q96QU8 1125 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 NABP2Q9BQ15 211 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ACTR3CQ9C0K3 210 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 BTRCQ9Y297 605 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 USH1CQ9Y6N9 552 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ARHGAP32A7KAX9 2087 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ZNF532Q9HCE3 1301 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ARFGEF3Q5TH69 2177 aa-0.46□□□□□ -2.48
RNU6-1228P-201ENST00000391014 ZNF462Q96JM2 2506 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 A0A1W2PPM0 123 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 VPS37CA5D8V6 355 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 UPK2O00526 184 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 HUS1O60921 280 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 MT-CO2P00403 227 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 GABRA1P14867 456 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 GPX2P18283 190 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 EMX1Q04741 257 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 PMVKQ15126 192 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 GUSBP1Q15486 140 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 MMDQ15546 238 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 FAM229BQ4G0N7 80 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 PABPC1L2AQ5JQF8 200 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 TMEM42Q69YG0 159 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 CLEC19AQ6UXS0 136 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 NDUFAF7Q7L592 441 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 NBPF5PQ86XG9 351 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 NECAB1Q8N987 351 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 C16orf78Q8WTQ4 265 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 SMIM8Q96KF7 97 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 C16orf45Q96MC5 204 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 SPACA5Q96QH8 159 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 TAPBPLQ9BX59 468 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 TSSK6Q9BXA6 273 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 PECRQ9BY49 303 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 SMDT1Q9H4I9 107 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 PLEKHA1Q9HB21 404 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 PTTG3PQ9NZH4 202 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 RCL1Q9Y2P8 373 aaKnown RBP-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 PHLDA3Q9Y5J5 127 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 AK9Q5TCS8 1911 aa-0.47□□□□□ -2.48
RNU6-1228P-201ENST00000391014 POLR3AO14802 1390 aaPredicted RBP-0.47□□□□□ -2.49
RNU6-1228P-201ENST00000391014 FREM1Q5H8C1 2179 aa-0.47□□□□□ -2.49
RNU6-1228P-201ENST00000391014 NCOA6Q14686 2063 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-1228P-201ENST00000391014 IGSF23A1L1A6 192 aa-0.48□□□□□ -2.49
RNU6-1228P-201ENST00000391014 TCAPO15273 167 aa-0.48□□□□□ -2.49
RNU6-1228P-201ENST00000391014 RHOCP08134 193 aa-0.48□□□□□ -2.49
RNU6-1228P-201ENST00000391014 CLTAP09496 248 aa-0.48□□□□□ -2.49
RNU6-1228P-201ENST00000391014 OR4A8P0C604 315 aa-0.48□□□□□ -2.49
RNU6-1228P-201ENST00000391014 SLC2A3P11169 496 aa-0.48□□□□□ -2.49
RNU6-1228P-201ENST00000391014 RFC3P40938 356 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms