RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 A0A1W2PRF3 423 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 A0A1W2PRM7 423 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 ZNF879B4DU55 563 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 C5orf67F2Z3F1 127 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 GGT2P36268 569 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 YWHAGP61981 247 aaKnown RBP eCLIP-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 PSG9Q00887 426 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 KDSRQ06136 332 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 ADIGQ0VDE8 80 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 PJVKQ0ZLH3 352 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 ART3Q13508 389 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 APOFQ13790 326 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 TMEM241Q24JQ0 296 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 MFSD4BQ5TF39 518 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 PRAMEF20Q5VT98 475 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 AADACL4Q5VUY2 407 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 KDELC1Q6UW63 502 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 ERASQ7Z444 233 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 DPPA2Q7Z7J5 298 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 KTN1-AS1Q86SY8 53 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 UMODL1-AS1Q8N2C9 162 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 TMEM156Q8N614 296 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 OR56B1Q8NGI3 324 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 SMARCD1Q96GM5 515 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 OR5B12Q96R08 314 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 SERPINI1Q99574 410 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 MRPL13Q9BYD1 178 aaKnown RBP-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 MMADHCQ9H3L0 296 aaPredicted RBP-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 HEBP1Q9NRV9 189 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 ATXN10Q9UBB4 475 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 HHLA3Q9XRX5 114 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 ADAMTSL3P82987 1691 aa-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 SPTBN1Q01082 2364 aaKnown RBP-2.23□□□□□ -2.77
TRAJ53-201ENST00000390485 PRRC2CQ9Y520 2896 aaKnown RBP-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 IGHV3-73A0A0B4J1V6 119 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 A0A1W2PRV1 198 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 MBD3O95983 291 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 IL1BP01584 269 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 GYPCP04921 128 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 ZNF728P0DKX0 622 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 MYL9P24844 172 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 CXCR1P25024 350 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 CALRP27797 417 aaKnown RBP-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 EVI2BP34910 448 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 MYCNOSP40205 109 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 ZNF80P51504 273 aaPredicted RBP-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 AQP4P55087 323 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 SEMG2Q02383 582 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 YWHAHQ04917 246 aaPredicted RBP-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 HADHQ16836 314 aaKnown RBP-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 KRTAP6-2Q3LI66 62 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 TMEM41BQ5BJD5 291 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 TMEM215Q68D42 235 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 WDR88Q6ZMY6 472 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 FAM231DQ6ZW35 169 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 MBOAT2Q6ZWT7 520 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 CATSPER4Q7RTX7 472 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 SLC35E3Q7Z769 313 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 LHFPL1Q86WI0 220 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 DRAXINQ8NBI3 349 aaPredicted RBP-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 PLPP5Q8NEB5 264 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 FAM83FQ8NEG4 500 aaPredicted RBP-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 OR1S2Q8NGQ3 325 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 C14orf79Q96F83 325 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 SRRQ9GZT4 340 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 TMEM222Q9H0R3 208 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 HMG20BQ9P0W2 317 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 KLK9Q9UKQ9 250 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 FANCMQ8IYD8 2048 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 USP9XQ93008 2570 aaPredicted RBP-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 SPTBN2O15020 2390 aa-2.24□□□□□ -2.77
TRAJ53-201ENST00000390485 NOS1P29475 1434 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 TRAV1-1A0A0B4J248 108 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 A6NDN8 102 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 MEIS3P1A6NDR6 274 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 SMKR1H3BMG3 65 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 ITGB1BP1O14713 200 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 DNAJB6O75190 326 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 B3GALNT1O75752 331 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 CLIC3O95833 236 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 FUT1P19526 365 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 PFN2P35080 140 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 CHCHD2P9Q5T1J5 151 aaPredicted RBP-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 SBSNQ6UWP8 590 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 PRNTQ86SH4 94 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 FER1L6-AS1Q8NA97 138 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 TNFAIP8L1Q8WVP5 186 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 ADPGKQ9BRR6 497 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 UPK3BQ9BT76 320 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 SLC5A7Q9GZV3 580 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 CFDP1Q9UEE9 299 aaPredicted RBP-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 MTCH2Q9Y6C9 303 aa-2.25□□□□□ -2.77
TRAJ53-201ENST00000390485 ZNF608Q9ULD9 1512 aaPredicted RBP-2.26□□□□□ -2.77
TRAJ53-201ENST00000390485 A0A1W2PPV9 198 aa-2.26□□□□□ -2.77
TRAJ53-201ENST00000390485 HMSDA8MTL9 139 aa-2.26□□□□□ -2.77
TRAJ53-201ENST00000390485 H0YC42 278 aa-2.26□□□□□ -2.77
TRAJ53-201ENST00000390485 SLC9A3R1O14745 358 aaPredicted RBP-2.26□□□□□ -2.77
TRAJ53-201ENST00000390485 UBDO15205 165 aa-2.26□□□□□ -2.77
TRAJ53-201ENST00000390485 RAD51CO43502 376 aa-2.26□□□□□ -2.77
TRAJ53-201ENST00000390485 MPZL2O60487 215 aa-2.26□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms