RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ITFG1Q8TB96 612 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 FAM45AQ8TCE6 357 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 C11orf40Q8WZ69 217 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RAB8BQ92930 207 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 YIPF5Q969M3 257 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 TESCQ96BS2 214 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 SMIM19Q96E16 107 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 PDXPQ96GD0 296 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 SFRP2Q96HF1 295 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 ZNF488Q96MN9 340 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 KCTD7Q96MP8 289 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 TSC22D3Q99576 134 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 CDX2Q99626 313 aaPredicted RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 GPR22Q99680 433 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 MRPL45Q9BRJ2 306 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 C2orf88Q9BSF0 95 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 FAIM2Q9BWQ8 316 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 UGT2B28Q9BY64 529 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RPP21Q9H633 154 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 ARMC7Q9H6L4 198 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 NHEJ1Q9H9Q4 299 aaPredicted RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RHOFQ9HBH0 211 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RDH14Q9HBH5 336 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 AGPAT4Q9NRZ5 378 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 SPANXB1Q9NS25 103 aaPredicted RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 CLN6Q9NWW5 311 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 SDHAF2Q9NX18 166 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 ZNF586Q9NXT0 402 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 BFARQ9NZS9 450 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 VAPAQ9P0L0 249 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 CD84Q9UIB8 345 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RWDD2AQ9UIY3 292 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 FBXO5Q9UKT4 447 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 FARSAQ9Y285 508 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 CNTLNQ9NXG0 1405 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 WDR7Q9Y4E6 1490 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 ARHGEF10O15013 1369 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 UQCRHLA0A096LP55 91 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 IGHV5-51A0A0C4DH38 117 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 A0A1B0GV90 55 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 TCRBV9S1A1TA0A576 114 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 PQLC2LA1A4F0 135 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 TSPAN11A1L157 253 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 EFCAB9A8MZ26 197 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 SEC14L6B5MCN3 397 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 ZNF878C9JN71 531 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 INS-IGF2F8WCM5 200 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 TSTD3H0UI37 97 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 H7C0C1 242 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 KCNK1O00180 336 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 HSD17B6O14756 317 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 UBDO15205 165 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 PFDN6O15212 129 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 SYNGR1O43759 233 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 ENSAO43768 121 aaKnown RBP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 SSNA1O43805 119 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 CDC40O60508 579 aaKnown RBP eCLIP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 SLC16A7O60669 478 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 PFDN1O60925 122 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 ENTPD6O75354 484 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 CLDN11O75508 207 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 TRAPPC6AO75865 159 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 OR2B3O76000 313 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 CNIH1O95406 144 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 ATP6V1G2O95670 118 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 HAND1O96004 215 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 GCGP01275 180 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 HBE1P02100 147 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 MT-ND4P03905 459 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 TYMSP04818 313 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 UQCRHP07919 91 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 LIMS3P0CW19 117 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 LIMS4P0CW20 117 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 IGHV3-43DP0DP04 118 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 AKR1C4P17516 323 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 ALOX5APP20292 161 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 GZMHP20718 246 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 HTR1DP28221 377 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 ERP29P30040 261 aaKnown RBP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 FOXN2P32314 431 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 SERPINB5P36952 375 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 RFC3P40938 356 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 RAB7AP51149 207 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 AQP5P55064 265 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 VSX2P58304 361 aaPredicted RBP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 ZNF121P58317 390 aaPredicted RBP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 TAS2R39P59534 338 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 TAS2R31P59538 309 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 SNAP25P60880 206 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 CDC42P60953 191 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 RPL31P62899 125 aaKnown RBP1.36□□□□□ -2.19
TRAV40-201ENST00000390467 IL5RAQ01344 420 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 SLC39A6Q13433 755 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 OR2F1Q13607 317 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 FZD2Q14332 565 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 PRPSAP1Q14558 356 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 GUSBP1Q15486 140 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 MAPK14Q16539 360 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 DUSP7Q16829 419 aa1.36□□□□□ -2.19
TRAV40-201ENST00000390467 TBC1D28Q2M2D7 210 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms