RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 FOXK1P85037 733 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 TEX30Q5JUR7 227 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 ACER2Q5QJU3 275 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 ACTR3CQ9C0K3 210 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 GNG12Q9UBI6 72 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 G3V3Q6 166 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 TCAPO15273 167 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 CLN5O75503 358 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 FDX2Q6P4F2 183 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 GABRG3Q99928 467 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 MYOZ1Q9NP98 299 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 CEP250Q9BV73 2442 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 A0A1W2PQF6 199 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZNF732B4DXR9 585 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 ISG15P05161 165 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 MMP9P14780 707 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 EN2P19622 333 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 RPP30P78346 268 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 APCDD1LQ8NCL9 501 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 BTF3L4Q96K17 158 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 SLC25A22Q9H936 323 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 CACNG5Q9UF02 275 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 ELOA3CA0A087WX78 387 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 LMO7DNF2Z398 122 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 H0YIZ8 118 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 KRASP01116 189 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZNF32P17041 273 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 MST1P26927 711 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 LRP11Q86VZ4 500 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 OR4A4PQ8NGN8 299 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 THOC3Q96J01 351 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 RNF126Q9BV68 326 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZDHHC11Q9H8X9 412 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 CACFD1Q9UGQ2 172 aa11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 TDRD6O60522 2096 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-201ENST00000389328 PTBP3O95758 552 aaKnown RBP11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 PPYP01298 95 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 IL2RAP01589 272 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZNF343Q6P1L6 599 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 H2BFWTQ7Z2G1 175 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 POC1AQ8NBT0 407 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 OR6X1Q8NH79 312 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZNF721Q8TF20 911 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZNF737O75373 536 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 HEXAP06865 529 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 COX5AP20674 150 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 TOMM20LQ6UXN7 152 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 LINC00114Q6XXX2 140 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 METTL1Q9UBP6 276 aaKnown RBP11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 A0A1W2PNV4 684 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 DVL1O14640 695 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 FBP1P09467 338 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 GABRA2P47869 451 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 IQCJQ1A5X6 159 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 Q3ZCU0 254 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 GPHA2Q96T91 129 aa11.53□□□□□ -0.56
TRAPPC9-201ENST00000389328 MEX3AA1L020 520 aaKnown RBP11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 TGFBR3LH3BV60 316 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 OPN1MWP04001 364 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 OPN1MW2P0DN77 364 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 OPN1MW3P0DN78 364 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZXDAP98168 799 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 CLN3Q13286 438 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 FZD5Q13467 585 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 GAPTQ8N292 157 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZNF519Q8TB69 540 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 SPSB2Q99619 263 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 PTPRDP23468 1912 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 TGIF2-C20orf24A0A0A6YYL0 155 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 CXorf65A6NEN9 183 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 FREM3P0C091 2139 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 PKIAP61925 76 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZNF439Q8NDP4 499 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 OR10A7Q8NGE5 316 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 FOXB1Q99853 325 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 MYOTQ9UBF9 498 aa11.52□□□□□ -0.56
TRAPPC9-201ENST00000389328 ARGFXA6NJG6 315 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 NPIPB9F8W1W9 429 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 MGST1P10620 155 aaKnown RBP11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 NTF3P20783 257 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 BSXQ3C1V8 233 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 PLAC9Q5JTB6 97 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 OR4A16Q8NH70 328 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 SOX7Q9BT81 388 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 LANCL2Q9NS86 450 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 FAM206AQ9NX38 181 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 TRAPPC1Q9Y5R8 145 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 DHRS7CA6NNS2 312 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 TMEM14DPA8MWL7 114 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZNF735P0CB33 412 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 DUSP3P51452 185 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZNF816Q0VGE8 651 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 EDDM3AQ14507 147 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 IL22RA2Q969J5 263 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 C12orf49Q9H741 205 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 P4HTMQ9NXG6 502 aa11.52□□□□□ -0.57
TRAPPC9-201ENST00000389328 A0A1B0GV90 55 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 RABEPKQ7Z6M1 372 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZDHHC23Q8IYP9 409 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 OR52M1Q8NGK5 317 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms