RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ANXA10Q9UJ72 324 aa8.65□□□□□ -1.03
LTN1-203ENST00000389195 C5orf51A6NDU8 294 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 A6NLC8 198 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 AHRRA9YTQ3 701 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 TNFSF12O43508 249 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 PRAF2O60831 178 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 IL5P05113 134 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 FCGR2CP31995 323 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 MEF2DQ14814 521 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 CLEC18BQ6UXF7 455 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 BHLHA15Q7RTS1 189 aaPredicted RBP8.64□□□□□ -1.03
LTN1-203ENST00000389195 NANOS1Q8WY41 292 aaKnown RBP8.64□□□□□ -1.03
LTN1-203ENST00000389195 CITED4Q96RK1 184 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 SLC25A21Q9BQT8 299 aaPredicted RBP8.64□□□□□ -1.03
LTN1-203ENST00000389195 ADAT1Q9BUB4 502 aaKnown RBP8.64□□□□□ -1.03
LTN1-203ENST00000389195 GSKIPQ9P0R6 139 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 ALX3O95076 343 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 SLC25A42Q86VD7 318 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 CDH26Q8IXH8 852 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 OR6K3Q8NGY3 331 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 HEXA-AS1Q9H8Q6 139 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 GHRLQ9UBU3 117 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 GPR132Q9UNW8 380 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 CACNA1BQ00975 2339 aa8.64□□□□□ -1.03
LTN1-203ENST00000389195 HIVEP3Q5T1R4 2406 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 TRAV14DV4A0A0A6YYC5 116 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 TRAV24A0A0B4J272 114 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 A0A0G2JNJ9 132 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 SERPINE3A8MV23 424 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 C1QTNF9BB2RNN3 333 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 NXPH3O95157 252 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 IGKV3-15P01624 115 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 IGHV3-13P01766 116 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 IGHV3-7P01780 117 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 C1QTNF9P0C862 333 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 CLEC9AQ6UXN8 241 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 GFRALQ6UXV0 394 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 OR8H3Q8N146 312 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 OR5L1Q8NGL2 311 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 Q9UFV3 132 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 METRNQ9UJH8 293 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 IGHV2OR16-5A0A0B4J2B6 119 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 hCG_1807616A0A1W2PRN6 198 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 SNRPGP15A8MWD9 76 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 TIMM8AO60220 97 aaPredicted RBP8.63□□□□□ -1.03
LTN1-203ENST00000389195 PDCD6O75340 191 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 COX5BP10606 129 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 FUT3P21217 361 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 SERPINF1P36955 418 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 MECP2P51608 486 aaKnown RBP8.63□□□□□ -1.03
LTN1-203ENST00000389195 SSBP1Q04837 148 aaKnown RBP8.63□□□□□ -1.03
LTN1-203ENST00000389195 ASCL4Q6XD76 172 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 LYG2Q86SG7 212 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 SUMF2Q8NBJ7 301 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 PPP1R1CQ8WVI7 109 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 OR10C1Q96KK4 312 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 USB1Q9BQ65 265 aaKnown RBP8.63□□□□□ -1.03
LTN1-203ENST00000389195 PARP12Q9H0J9 701 aaKnown RBP8.63□□□□□ -1.03
LTN1-203ENST00000389195 OR51I2Q9H344 312 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 RANBP3Q9H6Z4 567 aaPredicted RBP8.63□□□□□ -1.03
LTN1-203ENST00000389195 OSGIN2Q9Y236 505 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 NPTNQ9Y639 398 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 ARFGEF3Q5TH69 2177 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 USF3Q68DE3 2245 aa8.63□□□□□ -1.03
LTN1-203ENST00000389195 ATP6V1G2-DDX39BF2Z307 99 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 ERVH48-1M5A8F1 160 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 CST4P01036 141 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 COX5AP20674 150 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 HERPUD1Q15011 391 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 PNLIPRP3Q17RR3 467 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 MKXQ8IYA7 352 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 PXT1Q8NFP0 134 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 OR2Z1Q8NG97 314 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 OR5A2Q8NGI9 324 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 ANKHD1Q8IWZ3 2542 aaKnown RBP8.62□□□□□ -1.03
LTN1-203ENST00000389195 IGHV3OR15-7A0A075B7D8 119 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 IGKV1-6A0A0C4DH72 117 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 MBD3L4A6NDZ8 208 aaPredicted RBP8.62□□□□□ -1.03
LTN1-203ENST00000389195 MBD3L3A6NE82 208 aaPredicted RBP8.62□□□□□ -1.03
LTN1-203ENST00000389195 MBD3L5A6NJ08 208 aaPredicted RBP8.62□□□□□ -1.03
LTN1-203ENST00000389195 OR5H1A6NKK0 313 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 DLL1O00548 723 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 OR2A4O95047 310 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 NAT1P18440 290 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 GNG3P63215 75 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 OR8G1Q15617 311 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 C1orf185Q5T7R7 199 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 ALKAL2Q6UX46 152 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 LDLRAD3Q86YD5 345 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 FAM58AQ8N1B3 248 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 SPICQ8N5J4 248 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 MBD3L2Q8NHZ7 208 aaPredicted RBP8.62□□□□□ -1.03
LTN1-203ENST00000389195 OR2A7Q96R45 310 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 DCTN5Q9BTE1 182 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 ZNF391Q9UJN7 358 aa8.62□□□□□ -1.03
LTN1-203ENST00000389195 ARPC4-TTLL3A0A0A6YYG9 625 aa8.61□□□□□ -1.03
LTN1-203ENST00000389195 IGKV1D-13A0A0B4J2D9 117 aa8.61□□□□□ -1.03
LTN1-203ENST00000389195 PLSCR5A0PG75 271 aa8.61□□□□□ -1.03
LTN1-203ENST00000389195 H3BUI4 141 aa8.61□□□□□ -1.03
LTN1-203ENST00000389195 K7ENP7 123 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms