RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 ASCL3Q9NQ33 180 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 PRDM6Q9NQX0 595 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 SPANXB1Q9NS25 103 aaPredicted RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 YBX2Q9Y2T7 364 aaKnown RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 H3BTX0 84 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 CDC42EP2O14613 210 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 CHEK1O14757 476 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 GPR137BO60478 399 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 HBZP02008 142 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 HOXA5P20719 270 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 AGAP20933 346 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 CCKARP32238 428 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 P2RY4P51582 365 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 DLK1P80370 383 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 CDKN3Q16667 212 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 HIST3H3Q16695 136 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 ASPHD1Q5U4P2 390 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 RFLNAQ6ZTI6 216 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 C1QL4Q86Z23 238 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 PRSS35Q8N3Z0 413 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 TMEM178AQ8NBL3 297 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 AGBL5Q8NDL9 886 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 RGP1Q92546 391 aaPredicted RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 LINC00615Q96LM1 132 aaPredicted RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 TMEM59Q9BXS4 323 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 MRPL20Q9BYC9 149 aaKnown RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 WWTR1Q9GZV5 400 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 SEBOXQ9HB31 216 aaPredicted RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 SPANXA1Q9NS26 97 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 DHCR7Q9UBM7 475 aaKnown RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 PRODH2Q9UF12 536 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 COLQQ9Y215 455 aaPredicted RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 FBXO7Q9Y3I1 522 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 INSL5Q9Y5Q6 135 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 PDCD11Q14690 1871 aaKnown RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 A1L4Q6 167 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 A6NIZ1 184 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 COLCA2A8K830 154 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 G3V4G9 280 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 J3QRE1 110 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 GFRA3O60609 400 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 PMP2P02689 132 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 SRFP11831 508 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 PTHLHP12272 177 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 SLC6A8P48029 635 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 RAP1BP61224 184 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 CSNK1G2P78368 415 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 PRSS8Q16651 343 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 CLLU1OSQ5K130 101 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 OSR1Q8TAX0 266 aaPredicted RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 PTX4Q96A99 478 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 RBMXL1Q96E39 390 aaKnown RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 GNPNAT1Q96EK6 184 aaPredicted RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 AQP10Q96PS8 301 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 PRO1933Q9H354 126 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 MARCH5Q9NX47 278 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 FNDC1Q4ZHG4 1894 aaPredicted RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 TRAV14DV4A0A0A6YYC5 116 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 A0A1B0GTI1 187 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 ZNF264O43296 627 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 CYB5R3P00387 301 aaPredicted RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 IGHV2-70P01814 119 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 STATHP02808 62 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 TBXA2RP21731 343 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 S100A4P26447 101 aaKnown RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 LSM11P83369 360 aaKnown RBP eCLIP5.07□□□□□ -1.68e-9■■■■■ 51
RFC1-202ENST00000381897 RPL24P83731 157 aaKnown RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 FAM3AP98173 230 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 PNRC1Q12796 327 aaPredicted RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 FFAR4Q5NUL3 377 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 C10orf91Q5T1B1 145 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 GTF3AQ92664 365 aaKnown RBP5.07□□□□□ -1.6
RFC1-202ENST00000381897 EHFQ9NZC4 300 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 USP34Q70CQ2 3546 aa5.07□□□□□ -1.6
RFC1-202ENST00000381897 LILRA5A6NI73 299 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 ZNF716A6NP11 495 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 F8VVB4 439 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 F8VWA3 439 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 MT-ND6P03923 174 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 SEC11BP0C7V7 166 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 ZNF735P0CB33 412 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 GP1BBP13224 206 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 ZNF25P17030 456 aaPredicted RBP5.06□□□□□ -1.6
RFC1-202ENST00000381897 HRH1P35367 487 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 CXCL12P48061 93 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 ZNF705AQ6ZN79 300 aaPredicted RBP5.06□□□□□ -1.6
RFC1-202ENST00000381897 NUBPLQ8TB37 319 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 NMNAT2Q9BZQ4 307 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 ZNF701Q9NV72 531 aaPredicted RBP5.06□□□□□ -1.6
RFC1-202ENST00000381897 DTX4Q9Y2E6 619 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 GOLGA4Q13439 2230 aaKnown RBP5.06□□□□□ -1.6
RFC1-202ENST00000381897 A0A1B0GV50 99 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 A0A1W2PRF3 423 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 A0A1W2PRM7 423 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 ANGPTL7O43827 346 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 OR2J2O76002 312 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 GCGP01275 180 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 ZBTB25P24278 435 aa5.06□□□□□ -1.6
RFC1-202ENST00000381897 SRSF4Q08170 494 aaKnown RBP5.06□□□□□ -1.6
RFC1-202ENST00000381897 UBE3DQ7Z6J8 389 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms