RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SAXO1Q8IYX7 474 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 ACBD7Q8N6N7 88 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 OR4S1Q8NGB4 309 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 HAVCR2Q8TDQ0 301 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 CREB3L1Q96BA8 519 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 RNFT2Q96EX2 444 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 ADAT3Q96EY9 351 aaPredicted RBP10.49□□□□□ -0.73
RPAIN-202ENST00000381208 AKR1E2Q96JD6 320 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 OPALINQ96PE5 141 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 KRTAP4-8Q9BYQ9 185 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 TMEM133Q9H2Q1 129 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 GAL3ST2Q9H3Q3 398 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 S100A14Q9HCY8 104 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 NKX1-2Q9UD57 310 aaPredicted RBP10.49□□□□□ -0.73
RPAIN-202ENST00000381208 SIGLEC9Q9Y336 463 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 NOTCH3Q9UM47 2321 aa10.49□□□□□ -0.73
RPAIN-202ENST00000381208 TRGV10A0A0A0MS01 117 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 IGHV2-26A0A0B4J1V2 119 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 MEGF11A6BM72 1044 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 SAC3D1A6NKF1 404 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 H3BNX3 289 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 H3BSH0 61 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 J3QRE1 110 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 F2RL2O00254 374 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 XPNPEP2O43895 674 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 MPZL2O60487 215 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 ENTPD6O75354 484 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 FBXO24O75426 580 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 ALX3O95076 343 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 PRKACAP17612 351 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 HTR1DP28221 377 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 P2RX3P56373 397 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 TRAPPC6BQ86SZ2 158 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 RDH10Q8IZV5 341 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 CHST4Q8NCG5 386 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 NDNFQ8TB73 568 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 ZNF596Q8TC21 504 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 FGGYQ96C11 551 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 CPNE2Q96FN4 548 aaPredicted RBP10.48□□□□□ -0.73
RPAIN-202ENST00000381208 CLEC7AQ9BXN2 247 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 ZNF702PQ9H963 129 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 HMG20AQ9NP66 347 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 EXOSC4Q9NPD3 245 aaKnown RBP10.48□□□□□ -0.73
RPAIN-202ENST00000381208 RBFOX1Q9NWB1 397 aaKnown RBP10.48□□□□□ -0.73
RPAIN-202ENST00000381208 TAS2R3Q9NYW6 316 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 FRRS1LQ9P0K9 344 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 FOXJ3Q9UPW0 622 aa10.48□□□□□ -0.73
RPAIN-202ENST00000381208 IGKV1-9A0A0C4DH69 117 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 PSPNO60542 156 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 BCL3P20749 454 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 BRS3P32247 399 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 ALDH3A2P51648 485 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 TCF23Q7RTU1 214 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 NDUFA11Q86Y39 141 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 SYS1Q8N2H4 156 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 OR4F17Q8NGA8 305 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 OR52N4Q8NGI2 321 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 Q96MT0 163 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 OR4F4Q96R69 305 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 COMMD4Q9H0A8 199 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 ZFAND3Q9H8U3 227 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 INPP5EQ9NRR6 644 aa10.47□□□□□ -0.73
RPAIN-202ENST00000381208 EXOGQ9Y2C4 368 aaKnown RBP10.47□□□□□ -0.73
RPAIN-202ENST00000381208 FAM90A22PA8MWA6 464 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 EI24O14681 340 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 KDM4BO94953 1096 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 INMTO95050 263 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 FADS2O95864 444 aaKnown RBP10.46□□□□□ -0.74
RPAIN-202ENST00000381208 CSN2P05814 226 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 DBTP11182 482 aaKnown RBP10.46□□□□□ -0.74
RPAIN-202ENST00000381208 LMO1P25800 156 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 PAX6P26367 422 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 OR3A1P47881 315 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 NPBWR2P48146 333 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 ALKBH1Q13686 389 aaKnown RBP10.46□□□□□ -0.74
RPAIN-202ENST00000381208 PLA1AQ53H76 456 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 ARSJQ5FYB0 599 aaPredicted RBP10.46□□□□□ -0.74
RPAIN-202ENST00000381208 CCBE1Q6UXH8 406 aaPredicted RBP10.46□□□□□ -0.74
RPAIN-202ENST00000381208 HEPN1Q6WQI6 88 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 REC114Q7Z4M0 266 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 DYNAPQ8N1N2 210 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 OR5D14Q8NGL3 314 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 OR13C3Q8NGS6 347 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 CAPSLQ8WWF8 208 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 CORO2AQ92828 525 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 CHST6Q9GZX3 395 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 SERTAD4Q9NUC0 356 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 DPM3Q9P2X0 92 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 GSTK1Q9Y2Q3 226 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 LRRC42Q9Y546 428 aa10.46□□□□□ -0.74
RPAIN-202ENST00000381208 TMEM212A6NML5 194 aa10.45□□□□□ -0.74
RPAIN-202ENST00000381208 OR4C45A6NMZ5 311 aa10.45□□□□□ -0.74
RPAIN-202ENST00000381208 J3QLW9 94 aa10.45□□□□□ -0.74
RPAIN-202ENST00000381208 BAG2O95816 211 aa10.45□□□□□ -0.74
RPAIN-202ENST00000381208 CCDC159P0C7I6 412 aa10.45□□□□□ -0.74
RPAIN-202ENST00000381208 ZNF19P17023 458 aa10.45□□□□□ -0.74
RPAIN-202ENST00000381208 CALRP27797 417 aaKnown RBP10.45□□□□□ -0.74
RPAIN-202ENST00000381208 DUSP1P28562 367 aa10.45□□□□□ -0.74
RPAIN-202ENST00000381208 CEACAM3P40198 252 aa10.45□□□□□ -0.74
RPAIN-202ENST00000381208 RAB13P51153 203 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms