RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 ZNF318Q5VUA4 2279 aa10.68□□□□□ -0.7
GABPB1-203ENST00000380877 LYPD3O95274 346 aa10.68□□□□□ -0.7
GABPB1-203ENST00000380877 CELA3AP09093 270 aa10.68□□□□□ -0.7
GABPB1-203ENST00000380877 SURF2Q15527 256 aaPredicted RBP10.68□□□□□ -0.7
GABPB1-203ENST00000380877 C1orf185Q5T7R7 199 aa10.68□□□□□ -0.7
GABPB1-203ENST00000380877 OR14K1Q8NGZ2 314 aa10.68□□□□□ -0.7
GABPB1-203ENST00000380877 ST7LQ8TDW4 575 aa10.68□□□□□ -0.7
GABPB1-203ENST00000380877 C17orf50Q8WW18 174 aa10.68□□□□□ -0.7
GABPB1-203ENST00000380877 SLC25A38Q96DW6 304 aa10.68□□□□□ -0.7
GABPB1-203ENST00000380877 USB1Q9BQ65 265 aaKnown RBP10.68□□□□□ -0.7
GABPB1-203ENST00000380877 COMMD5Q9GZQ3 224 aa10.68□□□□□ -0.7
GABPB1-203ENST00000380877 PSG11Q9UQ72 335 aa10.68□□□□□ -0.7
GABPB1-203ENST00000380877 COL6A6A6NMZ7 2263 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 A0A0U1RQK1 487 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 BCL2L11O43521 198 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 CEACAM1P13688 526 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 RPS16P62249 146 aaKnown RBP10.67□□□□□ -0.7
GABPB1-203ENST00000380877 C1orf100Q5SVJ3 147 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 C10orf128Q5T292 105 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 FAHD2BQ6P2I3 314 aaPredicted RBP10.67□□□□□ -0.7
GABPB1-203ENST00000380877 RBMXL3Q8N7X1 1067 aaKnown RBP10.67□□□□□ -0.7
GABPB1-203ENST00000380877 LRRC75AQ8NAA5 344 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 WNT2BQ93097 391 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 FAHD2AQ96GK7 314 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 CIB3Q96Q77 187 aaPredicted RBP10.67□□□□□ -0.7
GABPB1-203ENST00000380877 G6PC2Q9NQR9 355 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 ZNF355PQ9NSJ1 428 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 STRAPQ9Y3F4 350 aaKnown RBP10.67□□□□□ -0.7
GABPB1-203ENST00000380877 A0A0G2JMM0 328 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 A0A1W2PPB8 328 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 A0A1W2PRS3 328 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 KIR3DP1A8MWS1 328 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 ADRB1P08588 477 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 H2AFB1P0C5Y9 115 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 OR5AC1P0C628 307 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 CD59P13987 128 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 ALDH3B1P43353 468 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 BTN1A1Q13410 526 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 HFEQ30201 348 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 FAM74A1Q5RGS3 127 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 FADS6Q8N9I5 356 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 ZFP62Q8NB50 900 aaPredicted RBP10.67□□□□□ -0.7
GABPB1-203ENST00000380877 TIMP4Q99727 224 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 PSENENQ9NZ42 101 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 ZNF724A8MTY0 619 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 C1orf196B1AJZ1 125 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 PRSS44E7EML9 344 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 CTSDP07339 412 aaPredicted RBP10.67□□□□□ -0.7
GABPB1-203ENST00000380877 SULT1A3P0DMM9 295 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 SULT1A4P0DMN0 295 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 CPN1P15169 458 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 CXCL3P19876 107 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 M6PRP20645 277 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 OPN3Q9H1Y3 402 aaPredicted RBP10.67□□□□□ -0.7
GABPB1-203ENST00000380877 RCL1Q9Y2P8 373 aaKnown RBP10.67□□□□□ -0.7
GABPB1-203ENST00000380877 CACNA1DQ01668 2161 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 ADAP1O75689 374 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 ZNF205O95201 554 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 DTYMKP23919 212 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 ZNF362Q5T0B9 420 aaPredicted RBP10.67□□□□□ -0.7
GABPB1-203ENST00000380877 ZBTB44Q8NCP5 570 aa10.67□□□□□ -0.7
GABPB1-203ENST00000380877 IGHV3-43A0A0B4J1X8 118 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 IGKV1D-43A0A0B4J1Z2 117 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 C3orf85A0A1B0GTC6 90 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 CST7O76096 145 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 ALX3O95076 343 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 IGHV3-43DP0DP04 118 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 DEFA4P12838 97 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 TESK1Q15569 626 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 TRAT1Q6PIZ9 186 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 MOGAT3Q86VF5 341 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 C17orf78Q8N4C9 275 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 VOPP1Q96AW1 172 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 POLEQ07864 2286 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 SHISA3A0PJX4 238 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 CLEC18AA5D8T8 446 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 TRIM64BA6NI03 449 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 TRDCB7Z8K6 153 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 HOXD4P09016 255 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-203ENST00000380877 SUB1P53999 127 aaKnown RBP eCLIP10.66□□□□□ -0.7
GABPB1-203ENST00000380877 RAB32Q13637 225 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 SNAI3Q3KNW1 292 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 GGNBP1Q5YKI7 109 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 S100A7AQ86SG5 101 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 CLEC18CQ8NCF0 446 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 OR5M8Q8NGP6 311 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 ERGIC1Q969X5 290 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 LPAR5Q9H1C0 372 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 SLC25A32Q9H2D1 315 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 HAND1O96004 215 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 SUCLG1P53597 346 aaKnown RBP10.66□□□□□ -0.7
GABPB1-203ENST00000380877 UBE2KP61086 200 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 C19orf57Q0VDD7 668 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 ZBTB37Q5TC79 503 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 Q6ZRG5 221 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 LYG1Q8N1E2 194 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 LFNGQ8NES3 379 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 OR5D13Q8NGL4 314 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 NANPQ8TBE9 248 aa10.66□□□□□ -0.7
GABPB1-203ENST00000380877 ARV1Q9H2C2 271 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms