RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 TEX47Q8TBZ9 253 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 RNFT2Q96EX2 444 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 NSMCE2Q96MF7 247 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 DGCR6LQ9BY27 220 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 MAGEL2Q9UJ55 1249 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 GTF2A1LQ9UNN4 478 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 AP4M1O00189 453 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 ARPC2O15144 300 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 CALCBP10092 127 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 SNU13P55769 128 aaKnown RBP13.52□□□□□ -0.25
HMGN1-203ENST00000380748 FOXE3Q13461 319 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 DIAPH2-AS1Q14236 149 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 ZNF829Q3KNS6 432 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-203ENST00000380748 RNF152Q8N8N0 203 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 BBS1Q8NFJ9 593 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 OR11H1Q8NG94 326 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 C4orf3Q8WVX3 66 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 CORO2AQ92828 525 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 MROQ9BYG7 248 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 SEBOXQ9HB31 216 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-203ENST00000380748 ISYNA1Q9NPH2 558 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 RBFOX1Q9NWB1 397 aaKnown RBP13.52□□□□□ -0.25
HMGN1-203ENST00000380748 TAS2R3Q9NYW6 316 aa13.52□□□□□ -0.25
HMGN1-203ENST00000380748 A0A087X0M5 115 aa13.51□□□□□ -0.25
HMGN1-203ENST00000380748 A0A1B0GTI1 187 aa13.51□□□□□ -0.25
HMGN1-203ENST00000380748 A0A1B0GX30 115 aa13.51□□□□□ -0.25
HMGN1-203ENST00000380748 TRIM64CA6NLI5 447 aa13.51□□□□□ -0.25
HMGN1-203ENST00000380748 SPNP16150 400 aa13.51□□□□□ -0.25
HMGN1-203ENST00000380748 GPR12P47775 334 aa13.51□□□□□ -0.25
HMGN1-203ENST00000380748 GLIPR1P48060 266 aa13.51□□□□□ -0.25
HMGN1-203ENST00000380748 VEGFCP49767 419 aa13.51□□□□□ -0.25
HMGN1-203ENST00000380748 KPNB1Q14974 876 aaKnown RBP13.51□□□□□ -0.25
HMGN1-203ENST00000380748 ASPHD1Q5U4P2 390 aa13.51□□□□□ -0.25
HMGN1-203ENST00000380748 NIPSNAP1Q9BPW8 284 aa13.51□□□□□ -0.25
HMGN1-203ENST00000380748 PCDHB16Q9NRJ7 776 aa13.51□□□□□ -0.25
HMGN1-203ENST00000380748 H3BN98 237 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 SIRPB1O00241 398 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 PRODHO43272 600 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 ENTPD6O75354 484 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 SRSF10O75494 262 aaKnown RBP13.5□□□□□ -0.25
HMGN1-203ENST00000380748 IGKV1D-33P01593 117 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 IGKV1-33P01594 117 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 ELANEP08246 267 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 MRPL3P09001 348 aaKnown RBP13.5□□□□□ -0.25
HMGN1-203ENST00000380748 NFYBP25208 207 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 PTGFRP43088 359 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 NPBWR2P48146 333 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 RPS7P62081 194 aaKnown RBP13.5□□□□□ -0.25
HMGN1-203ENST00000380748 ROM1Q03395 351 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 AESQ08117 197 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 CPOQ8IVL8 374 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 ENTHD1Q8IYW4 607 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 ZNF679Q8IYX0 411 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 OR4D6Q8NGJ1 314 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 YIPF3Q9GZM5 350 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 GLS2Q9UI32 602 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 COPS3Q9UNS2 423 aa13.5□□□□□ -0.25
HMGN1-203ENST00000380748 ZNF254O75437 659 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 IGHV3-7P01780 117 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 GP9P14770 177 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 SLC2A5P22732 501 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 RIDAP52758 137 aaKnown RBP13.49□□□□□ -0.25
HMGN1-203ENST00000380748 ZNF146Q15072 292 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 UBE2V2Q15819 145 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 MICAQ29983 383 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 BCL2L15Q5TBC7 163 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 ZNF429Q86V71 674 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 FAM58AQ8N1B3 248 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 OR9G1Q8NH87 305 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 LEAP2Q969E1 77 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 HRASLS5Q96KN8 279 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 IKZF2Q9UKS7 526 aa13.49□□□□□ -0.25
HMGN1-203ENST00000380748 TRBV2A0A0J9YWF9 115 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 LOC110117498-PIK3R3F6TDL0 507 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 H3BSH0 61 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 LDLRAD4O15165 306 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 SASH3O75995 380 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 OR8U8P0C7N1 319 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 HSD17B1P14061 328 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 BCL3P20749 454 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 CFHR3Q02985 330 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 C17orf58Q2M2W7 97 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 SLC35D3Q5M8T2 416 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 PLEKHG7Q6ZR37 379 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 Q6ZSR3 168 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 ELMOD2Q8IZ81 293 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 KIRREL1Q96J84 757 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 GON7Q9BXV9 100 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 ABCG5Q9H222 651 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 ING3Q9NXR8 418 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 AMMECR1Q9Y4X0 333 aaPredicted RBP13.48□□□□□ -0.25
HMGN1-203ENST00000380748 RYR1P21817 5038 aa13.48□□□□□ -0.25
HMGN1-203ENST00000380748 ODAMA1E959 279 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 DHRS7CA6NNS2 312 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 MAGEB4O15481 346 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-203ENST00000380748 OR2H2O95918 312 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 IGHG4P01861 327 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 PRKACAP17612 351 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 MAGEA2P43356 314 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 CDC42P60953 191 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms