RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 UBE2J1Q9Y385 318 aaPredicted RBP14.09□□□□□ -0.15
PDLIM4-202ENST00000379018 ZNF670-ZNF695F2Z2N8 137 aa14.08□□□□□ -0.16
PDLIM4-202ENST00000379018 M0QZK8 103 aa14.08□□□□□ -0.16
PDLIM4-202ENST00000379018 CEACAM3P40198 252 aa14.08□□□□□ -0.16
PDLIM4-202ENST00000379018 MNDAP41218 407 aa14.08□□□□□ -0.16
PDLIM4-202ENST00000379018 ACTR3P61158 418 aa14.08□□□□□ -0.16
PDLIM4-202ENST00000379018 GK3PQ14409 553 aa14.08□□□□□ -0.16
PDLIM4-202ENST00000379018 HES1Q14469 280 aa14.08□□□□□ -0.16
PDLIM4-202ENST00000379018 ENTHD1Q8IYW4 607 aa14.08□□□□□ -0.16
PDLIM4-202ENST00000379018 FAM58AQ8N1B3 248 aa14.08□□□□□ -0.16
PDLIM4-202ENST00000379018 YIPF7Q8N8F6 280 aa14.08□□□□□ -0.16
PDLIM4-202ENST00000379018 SLC25A19Q9HC21 320 aa14.08□□□□□ -0.16
PDLIM4-202ENST00000379018 MRM2Q9UI43 246 aaKnown RBP14.08□□□□□ -0.16
PDLIM4-202ENST00000379018 SERPINE3A8MV23 424 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 B2RBV5 119 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 BUB1B-PAK6H3BSN5 160 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 PRKYO43930 277 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 GATBO75879 557 aaKnown RBP14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 CYB5AP00167 134 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 SNRNP70P08621 437 aaKnown RBP14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 NFYBP25208 207 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 MYCNOSP40205 109 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 GLIPR1P48060 266 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 FUT6P51993 359 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 SCN1BQ07699 218 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 TRIM25Q14258 630 aaKnown RBP14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 HNF4GQ14541 408 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 HLA-DRB5Q30154 266 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 UTF1Q5T230 341 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 OR56B4Q8NH76 319 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 ADI1Q9BV57 179 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 HHLA2Q9UM44 414 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 GSTK1Q9Y2Q3 226 aa14.07□□□□□ -0.16
PDLIM4-202ENST00000379018 DHRS7CA6NNS2 312 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 ENTPD6O75354 484 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 DCTN3O75935 186 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 IGLV1-47P01700 117 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 IGHV3-7P01780 117 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 FAM106CPP0CH98 169 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 MNAT1P51948 309 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 AESQ08117 197 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 KLHL22Q53GT1 634 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 NKAPLQ5M9Q1 402 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 HEPN1Q6WQI6 88 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 SSX6Q7RTT6 188 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 Q8IYB0 196 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 ADGRG5Q8IZF4 528 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 OR4D6Q8NGJ1 314 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 CHPT1Q8WUD6 406 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 TOMM40LQ969M1 308 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 RFT1Q96AA3 541 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 RPEQ96AT9 228 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 P2RX4Q99571 388 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 CHST5Q9GZS9 411 aa14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 EXOSC4Q9NPD3 245 aaKnown RBP14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 H2AFY2Q9P0M6 372 aaPredicted RBP14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 ZMAT5Q9UDW3 170 aaKnown RBP14.06□□□□□ -0.16
PDLIM4-202ENST00000379018 TRBV2A0A0J9YWF9 115 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 C3orf84H3BNL1 204 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 ATP5HO75947 161 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 OR2H2O95918 312 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 SERPINA3P01011 423 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 KRT8P05787 483 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 ANXA8P13928 327 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 TMEM11P17152 192 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 CCL1P22362 96 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 ECI1P42126 302 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 PTGFRP43088 359 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 ATP1B3P54709 279 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 PRRX1P54821 245 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 DEFB136Q30KP8 78 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 CCDC144NLQ6NUI1 221 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 MEPCEQ7L2J0 689 aaKnown RBP14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 ZNF695Q8IW36 515 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 CANT1Q8WVQ1 401 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 CREB3L1Q96BA8 519 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 ADGRL4Q9HBW9 690 aa14.05□□□□□ -0.16
PDLIM4-202ENST00000379018 ZNF44P15621 663 aa14.04□□□□□ -0.16
PDLIM4-202ENST00000379018 ERP29P30040 261 aaKnown RBP14.04□□□□□ -0.16
PDLIM4-202ENST00000379018 CRISP1P54107 249 aa14.04□□□□□ -0.16
PDLIM4-202ENST00000379018 SLC35B1P78383 322 aa14.04□□□□□ -0.16
PDLIM4-202ENST00000379018 BNIP1Q12981 228 aa14.04□□□□□ -0.16
PDLIM4-202ENST00000379018 Q6ZSR3 168 aa14.04□□□□□ -0.16
PDLIM4-202ENST00000379018 LCNL1Q6ZST4 164 aa14.04□□□□□ -0.16
PDLIM4-202ENST00000379018 CATSPERDQ86XM0 798 aa14.04□□□□□ -0.16
PDLIM4-202ENST00000379018 DRAM1Q8N682 238 aa14.04□□□□□ -0.16
PDLIM4-202ENST00000379018 RAX2Q96IS3 184 aa14.04□□□□□ -0.16
PDLIM4-202ENST00000379018 CLN6Q9NWW5 311 aa14.04□□□□□ -0.16
PDLIM4-202ENST00000379018 GAR1Q9NY12 217 aaKnown RBP14.04□□□□□ -0.16
PDLIM4-202ENST00000379018 ODAMA1E959 279 aa14.03□□□□□ -0.16
PDLIM4-202ENST00000379018 FUOMA2VDF0 154 aa14.03□□□□□ -0.16
PDLIM4-202ENST00000379018 CCL24O00175 119 aa14.03□□□□□ -0.16
PDLIM4-202ENST00000379018 SH2D1BO14796 132 aa14.03□□□□□ -0.16
PDLIM4-202ENST00000379018 RAMP3O60896 148 aa14.03□□□□□ -0.16
PDLIM4-202ENST00000379018 APOL3O95236 402 aa14.03□□□□□ -0.16
PDLIM4-202ENST00000379018 RBP2P50120 134 aa14.03□□□□□ -0.16
PDLIM4-202ENST00000379018 MTCP1P56278 107 aa14.03□□□□□ -0.16
PDLIM4-202ENST00000379018 ATXN7L3Q14CW9 347 aaPredicted RBP14.03□□□□□ -0.16
PDLIM4-202ENST00000379018 ZNF146Q15072 292 aa14.03□□□□□ -0.16
PDLIM4-202ENST00000379018 LTC4SQ16873 150 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms