RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 IFNA10P01566 189 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 TNFRSF1AP19438 455 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 KLK2P20151 261 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 SNRPEP62304 92 aaKnown RBP12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 CA5BP1Q8WTZ4 195 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 GALMQ96C23 342 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 SLC25A38Q96DW6 304 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 HEYLQ9NQ87 328 aaPredicted RBP12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 FBXO7Q9Y3I1 522 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 RAB27BO00194 218 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 MSL2Q9HCI7 577 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 G6PC2Q9NQR9 355 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 LRP5LA4QPB2 252 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 ZNF205O95201 554 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 KLF9Q13886 244 aaPredicted RBP12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 PIGYQ3MUY2 71 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 ACOT7LQ6ZUV0 252 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 CDH26Q8IXH8 852 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 BMPERQ8N8U9 685 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 OR13C8Q8NGS7 320 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 OR4A16Q8NH70 328 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 LRRC29Q8WV35 223 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 RND1Q92730 232 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 SDSLQ96GA7 329 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 ERRFI1Q9UJM3 462 aaPredicted RBP12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 CADP27708 2225 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 MED13LQ71F56 2210 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 PRR33A8MZF0 331 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 AHRRA9YTQ3 701 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 OR13C7P0DN81 318 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 FPR2P25090 351 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 MICBQ29980 383 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 SNAI3Q3KNW1 292 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 FDX2Q6P4F2 183 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 KCNRGQ8N5I3 272 aa12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 ELF5Q9UKW6 265 aaPredicted RBP12.36□□□□□ -0.43
SHROOM1-203ENST00000378679 TMEM30CPA0ZSE6 113 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 FAM74A7A6NL05 159 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 IFNA1P01562 189 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 CLPSP04118 112 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 GPR12P47775 334 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 NDUFA6P56556 154 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 RSPO4Q2I0M5 234 aaPredicted RBP12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 FAM74A3Q4VXF1 159 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 PLA1AQ53H76 456 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 SLC25A53Q5H9E4 307 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 OR5A2Q8NGI9 324 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 LHFPL5Q8TAF8 219 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 C2orf50Q96LR7 162 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 FAM117AQ9C073 453 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 ANXA10Q9UJ72 324 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 HEATR5AQ86XA9 2040 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 MPC2O95563 127 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 EFNB1P98172 346 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 SSX9Q7RTT3 188 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 RGP1Q92546 391 aaPredicted RBP12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 ZNF837Q96EG3 531 aaPredicted RBP12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 MAGT1Q9H0U3 335 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 FN3KRPQ9HA64 309 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 FAM212BQ9NTI7 297 aaPredicted RBP12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 DEPPQ9NTK1 212 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 TAAR3PQ9P1P4 343 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 PURGQ9UJV8 347 aaKnown RBP12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 hCG_1809904A0A1W2PP81 198 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 A0A1W2PPE2 198 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 A0A1W2PR64 198 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 A0A1W2PRV1 198 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 TRIM64BA6NI03 449 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 OR2F2O95006 317 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 TNFSF10P50591 281 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 RPP30P78346 268 aaKnown RBP12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 OR2F1Q13607 317 aa12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 RSPO3Q9BXY4 272 aaPredicted RBP12.35□□□□□ -0.43
SHROOM1-203ENST00000378679 EFNA2O43921 213 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 S100PP25815 95 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 HBG1P69891 147 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 HBG2P69892 147 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 S100A12P80511 92 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 C10orf128Q5T292 105 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 H2BFWTQ7Z2G1 175 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 OR1S2Q8NGQ3 325 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 TIMD4Q96H15 378 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 IFT22Q9H7X7 185 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 TP53BP1Q12888 1972 aaPredicted RBP12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 FOSL1P15407 271 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 NQO2P16083 231 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 LIMK1P53667 647 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 PRAMEF5Q5TYX0 476 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 PRAMEF6Q5VXH4 476 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 OPN3Q9H1Y3 402 aaPredicted RBP12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 AMDHD2Q9Y303 409 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 PHF3Q92576 2039 aaKnown RBP12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 LINC00862A6NCI5 91 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 TRIM77I1YAP6 450 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 KCNJ3P48549 501 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 PDLIM3Q53GG5 364 aaPredicted RBP12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 LAMTOR1Q6IAA8 161 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 FAM185AQ8N0U4 392 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 C17orf78Q8N4C9 275 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms