RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PRSS12P56730 875 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 TOMM20LQ6UXN7 152 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 ZNRF4Q8WWF5 429 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 NTMQ9P121 344 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 TMED3Q9Y3Q3 217 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 NYNRINQ9P2P1 1898 aaKnown RBP13.25□□□□□ -0.29
NPHP4-201ENST00000378156 LEUTXA8MZ59 168 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 AP4M1O00189 453 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 CCL2P13500 99 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 TCTEX1D1Q8N7M0 179 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 APOBEC4Q8WW27 367 aaKnown RBP13.25□□□□□ -0.29
NPHP4-201ENST00000378156 ASB5Q8WWX0 329 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 ZNF426Q9BUY5 554 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 TMEM30CPA0ZSE6 113 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 ACTL6AO96019 429 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 ANKRD34CP0C6C1 535 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 PGA3P0DJD8 388 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 ZNF250P15622 560 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 PTTG1IPP53801 180 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 BPIFB3P59826 476 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 DNASE2BQ8WZ79 361 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 MRPS24Q96EL2 167 aaKnown RBP13.25□□□□□ -0.29
NPHP4-201ENST00000378156 ZNF71Q9NQZ8 489 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-201ENST00000378156 TRAPPC1Q9Y5R8 145 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 ELOA3CA0A087WX78 387 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-201ENST00000378156 C7orf66A4D0T2 115 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 CLEC18AA5D8T8 446 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 AQP7O14520 342 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 OR7C2O60412 319 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 CTSBP07858 339 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 CYC1P08574 325 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 TMEM183BQ1AE95 376 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 CLEC18CQ8NCF0 446 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 OR8B12Q8NGG6 310 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 PGLYRP3Q96LB9 341 aa13.25□□□□□ -0.29
NPHP4-201ENST00000378156 RIF1Q5UIP0 2472 aaKnown RBP13.25□□□□□ -0.29
NPHP4-201ENST00000378156 A0A1W2PPC1 479 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 LY86O95711 162 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 FBP1P09467 338 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 LIFP15018 202 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 NUFIP2Q7Z417 695 aaKnown RBP13.24□□□□□ -0.29
NPHP4-201ENST00000378156 C6orf201Q7Z4U5 140 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 TRGV10A0A0A0MS01 117 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 SEMA7AO75326 666 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 IAPPP10997 89 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 SLC25A6P12236 298 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 TUSC5Q8IXB3 177 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 SDHCQ99643 169 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-201ENST00000378156 COMMD5Q9GZQ3 224 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 GALR2O43603 387 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-201ENST00000378156 NGFRP08138 427 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 IFITM2Q01629 132 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 PLAC9Q5JTB6 97 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 UCN2Q96RP3 112 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 FAAP24Q9BTP7 215 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 GLRX2Q9NS18 164 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 OPN4Q9UHM6 478 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 MMP24Q9Y5R2 645 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 GREB1Q4ZG55 1949 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 A0A0G2JMZ2 1700 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 LRRC37A2A6NM11 1700 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 CDC14BO60729 498 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 MPC2O95563 127 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 GABRA1P14867 456 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 CCKARP32238 428 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 MLF1P58340 268 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 LBHQ53QV2 105 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-201ENST00000378156 FAM24BQ8N5W8 94 aa13.24□□□□□ -0.29
NPHP4-201ENST00000378156 LINC00862A6NCI5 91 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 CD82P27701 267 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 MICBQ29980 383 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 FAM210BQ96KR6 192 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 TMPRSS13Q9BYE2 586 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 FAM117AQ9C073 453 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 OTOFQ9HC10 1997 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 SLC31A2O15432 143 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 PDCD6O75340 191 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 SFT2D2O95562 160 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 NGFP01138 241 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 C19orf57Q0VDD7 668 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 GGTLC2Q14390 218 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 CLEC12BQ2HXU8 276 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 PRSS54Q6PEW0 395 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 SEZ6L2Q6UXD5 910 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 SCARF2Q96GP6 870 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-201ENST00000378156 TAAR6Q96RI8 345 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 NMES1Q9C002 83 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 GHITMQ9H3K2 345 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 TDRD6O60522 2096 aaKnown RBP13.23□□□□□ -0.29
NPHP4-201ENST00000378156 BVESQ8NE79 360 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 TMEM37Q8WXS4 190 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 CA10Q9NS85 328 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 DNPH1O43598 174 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 CST2P09228 141 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 USF1P22415 310 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-201ENST00000378156 RPS16P62249 146 aaKnown RBP13.23□□□□□ -0.29
NPHP4-201ENST00000378156 TMEM241Q24JQ0 296 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 PET117Q6UWS5 81 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 TMEM108Q6UXF1 575 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 CRIPAKQ8N1N5 446 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms