RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SLC7A11Q9UPY5 501 aa9.42□□□□□ -0.9
BEST1-201ENST00000378043 STARD10Q9Y365 291 aa9.42□□□□□ -0.9
BEST1-201ENST00000378043 ZFHX4Q86UP3 3567 aa9.42□□□□□ -0.9
BEST1-201ENST00000378043 OR7C1O76099 320 aaPredicted RBP9.42□□□□□ -0.9
BEST1-201ENST00000378043 FUT3P21217 361 aa9.42□□□□□ -0.9
BEST1-201ENST00000378043 GDF1P27539 372 aa9.42□□□□□ -0.9
BEST1-201ENST00000378043 RFC3P40938 356 aa9.42□□□□□ -0.9
BEST1-201ENST00000378043 DVL1P1P54792 670 aaPredicted RBP9.42□□□□□ -0.9
BEST1-201ENST00000378043 NHLH2Q02577 135 aa9.42□□□□□ -0.9
BEST1-201ENST00000378043 MALLQ13021 153 aa9.42□□□□□ -0.9
BEST1-201ENST00000378043 HPSE2Q8WWQ2 592 aa9.42□□□□□ -0.9
BEST1-201ENST00000378043 KIRREL1Q96J84 757 aa9.42□□□□□ -0.9
BEST1-201ENST00000378043 ZNF175Q9Y473 711 aa9.42□□□□□ -0.9
BEST1-201ENST00000378043 PHF1O43189 567 aaPredicted RBP9.41□□□□□ -0.9
BEST1-201ENST00000378043 PPYP01298 95 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 DANCRP0C864 163 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 TMEM211Q6ICI0 200 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 UBALD2Q8IYN6 164 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 SLC35G3Q8N808 338 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 Q8NFD4 153 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 RXFP4Q8TDU9 374 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 SECTM1Q8WVN6 248 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 USB1Q9BQ65 265 aaKnown RBP9.41□□□□□ -0.9
BEST1-201ENST00000378043 PRDM14Q9GZV8 571 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 ZNF442Q9H7R0 627 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 MRPS18CQ9Y3D5 142 aaKnown RBP9.41□□□□□ -0.9
BEST1-201ENST00000378043 B4E171 279 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 C1QL1O75973 258 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 IGHEP01854 428 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 CRYBA1P05813 215 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 SPP1P10451 314 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 DUSP1P28562 367 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 GNRHRP30968 328 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 TSPAN7P41732 249 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 FOXG1P55316 489 aaPredicted RBP9.41□□□□□ -0.9
BEST1-201ENST00000378043 UCP2P55851 309 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 SPINK14Q6IE38 97 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 LGI3Q8N145 548 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 CT55Q8WUE5 264 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 CPNE4Q96A23 557 aaPredicted RBP9.41□□□□□ -0.9
BEST1-201ENST00000378043 AKR1E2Q96JD6 320 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 GINS3Q9BRX5 216 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 IER2Q9BTL4 223 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 SH3BGRL3Q9H299 93 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 PRDM6Q9NQX0 595 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 SLC7A10Q9NS82 523 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 CACFD1Q9UGQ2 172 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 RCL1Q9Y2P8 373 aaKnown RBP9.41□□□□□ -0.9
BEST1-201ENST00000378043 POMT1Q9Y6A1 747 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 TNRC6AQ8NDV7 1962 aaKnown RBP9.41□□□□□ -0.9
BEST1-201ENST00000378043 MED13Q9UHV7 2174 aa9.41□□□□□ -0.9
BEST1-201ENST00000378043 ZNF503-AS2A6NEH8 195 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 COLCA2A8K830 154 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 GPR137BO60478 399 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 CER1O95813 267 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 SEC11BP0C7V7 166 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 LMO1P25800 156 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 P2RY1P47900 373 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 CYB561P49447 251 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 ESPL1Q14674 2120 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 MIDNQ504T8 468 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 FAM76BQ5HYJ3 339 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 FBXW12Q6X9E4 464 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 OR4D5Q8NGN0 318 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 SYT3Q9BQG1 590 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 SMOC1Q9H4F8 434 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 FAM212BQ9NTI7 297 aaPredicted RBP9.4□□□□□ -0.9
BEST1-201ENST00000378043 PQLC2LA1A4F0 135 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 MPPED1O15442 326 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 ST8SIA3O43173 380 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 NME2P1O60361 137 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 CELA3AP09093 270 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 CCL2P13500 99 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 SNCAP37840 140 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 PMELP40967 661 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 KCNJ3P48549 501 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 RAB13P51153 203 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 DCAF12Q5T6F0 453 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 GPR157Q5UAW9 335 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 C9orf135Q5VTT2 229 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 MEX3BQ6ZN04 569 aaKnown RBP9.4□□□□□ -0.9
BEST1-201ENST00000378043 OR56B2PQ8NGI1 322 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 TMEM45BQ96B21 275 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 TECTBQ96PL2 329 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
BEST1-201ENST00000378043 PRRG4Q9BZD6 226 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 C11orf1Q9H5F2 150 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 ESRP2Q9H6T0 727 aaKnown RBP9.4□□□□□ -0.9
BEST1-201ENST00000378043 PLSCR2Q9NRY7 297 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 PARPBPQ9NWS1 579 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 IL36RNQ9UBH0 155 aa9.4□□□□□ -0.9
BEST1-201ENST00000378043 A0A096LPE4 126 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 A0A1W2PPZ6 126 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 SERPINA7P05543 415 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 PRKACAP17612 351 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 BCL3P20749 454 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 GLP1RP43220 463 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 ASCL1P50553 236 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 ARF1P84077 181 aaKnown RBP9.4□□□□□ -0.91
BEST1-201ENST00000378043 IL13RA2Q14627 380 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms