RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 SPINK14Q6IE38 97 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 HAGHLQ6PII5 290 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 SLC25A26Q70HW3 274 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 C1orf210Q8IVY1 113 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM185AQ8N0U4 392 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 CCDC71LQ8N9Z2 235 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 OR4D5Q8NGN0 318 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 OR10Z1Q8NGY1 313 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM173AQ9BQD7 235 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 GINS3Q9BRX5 216 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 DDA1Q9BW61 102 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 SLC7A10Q9NS82 523 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 PARPBPQ9NWS1 579 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 LRFN1Q9P244 771 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 ZDHHC8Q9ULC8 765 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 NOSIPQ9Y314 301 aaKnown RBP10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 PRELID3BQ9Y3B1 194 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 KLF2Q9Y5W3 355 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 CFAP54Q96N23 3096 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 H7C2Y5 167 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 DANCRP0C864 163 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 ZNF883P0CG24 379 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 SPP1P10451 314 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 LMO1P25800 156 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 CLDN18P56856 261 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 ARF1P84077 181 aaKnown RBP10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 CBLN2Q8IUK8 224 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 DMBX1Q8NFW5 382 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 OR11L1Q8NGX0 322 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 BSCL2Q96G97 398 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 TAAR9Q96RI9 348 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 FGF23Q9GZV9 251 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 C11orf1Q9H5F2 150 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 ZNF442Q9H7R0 627 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 ZNF703Q9H7S9 590 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 WFDC1Q9HC57 220 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM212BQ9NTI7 297 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 C9JQL5 133 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 MPPED1O15442 326 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 ST8SIA3O43173 380 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 SCGB1D2O95969 90 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 NAPSAO96009 420 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 F12P00748 615 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 SFTA3P0C7M3 94 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 GNRHRP30968 328 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 FGF12P61328 243 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 PDCD1Q15116 288 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 Q6ZRG5 221 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 COMMD1Q8N668 190 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 NAXEQ8NCW5 288 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 OR2M7Q8NG81 312 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 OR52M1Q8NGK5 317 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 OR5L1Q8NGL2 311 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 THOC3Q96J01 351 aaKnown RBP10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 TMEM56Q96MV1 263 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 TP53RKQ96S44 253 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 SCRT1Q9BWW7 348 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 RNF122Q9H9V4 155 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 Q9N2K0 584 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 PRDM6Q9NQX0 595 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 TMEM56-RWDD3S4R434 201 aa10.11□□□□□ -0.79
TNFRSF9-201ENST00000377507 BORCS7-ASMTA0A0B4J1R7 106 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 PHF1O43189 567 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 OR7C1O76099 320 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 DIRAS3O95661 229 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 CDS2O95674 445 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 IGHV3-9P01782 118 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 HERV-K104P61576 105 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 RND3P61587 244 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 SRPXP78539 464 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 CEACAM21Q3KPI0 293 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 IGSF11Q5DX21 431 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 OR56B2PQ8NGI1 322 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 HPSE2Q8WWQ2 592 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 EXTL1Q92935 676 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 KIRREL1Q96J84 757 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 SMIM3Q9BZL3 60 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 TMEM222Q9H0R3 208 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM86C1Q9NVL1 165 aa10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 FBXO9Q9UK97 447 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 TNRC18O15417 2968 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF9-201ENST00000377507 C3orf85A0A1B0GTC6 90 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 ZNF724A8MTY0 619 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 OR8U9P0C7N5 309 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 PVALBP20472 110 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 CD80P33681 288 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 ID4P47928 161 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 RAB5CP51148 216 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 ZXDAP98168 799 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 PRDX4Q13162 271 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 FBXW12Q6X9E4 464 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 RAB11FIP2Q7L804 512 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 SLC35G3Q8N808 338 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 TMEM105Q8N8V8 129 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 OR8U1Q8NH10 309 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 GTF3AQ92664 365 aaKnown RBP10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 APOBEC3DQ96AK3 386 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 USB1Q9BQ65 265 aaKnown RBP10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 PRRG4Q9BZD6 226 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms