RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 TMEM104Q8NE00 496 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 OR8B3Q8NGG8 313 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 NTNG2Q96CW9 530 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 VWCEQ96DN2 955 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 OR8B2Q96RD0 313 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 TRDCB7Z8K6 153 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 COX6A1P12074 109 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 GZMHP20718 246 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 COX7A1P24310 79 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 CD80P33681 288 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 BMI1P35226 326 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 CLLU1Q5K131 121 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 SPICQ8N5J4 248 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 ACY3Q96HD9 319 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 AKR1E2Q96JD6 320 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 GPX7Q96SL4 187 aaPredicted RBP15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 OOEPA6NGQ2 149 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 UMAD1C9J7I0 102 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 TMPRSS2O15393 492 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 CST7O76096 145 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 C1QCP02747 245 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 LIMS1P48059 325 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 RELL2Q8NC24 303 aaPredicted RBP15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 OSGIN2Q9Y236 505 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 PRR33A8MZF0 331 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 MASP2O00187 686 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 GSTZ1O43708 216 aaPredicted RBP15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 CA11O75493 328 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 PRSS53Q2L4Q9 553 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 TMEM123Q8N131 208 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 ST8SIA2Q92186 375 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 IGHV3-43A0A0B4J1X8 118 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 IGHV3-43DP0DP04 118 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 IL36GQ9NZH8 169 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 PCM1Q15154 2024 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 C9orf170A2RU37 121 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 ACP1P24666 158 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 PDZK1IP1Q13113 114 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 ZNF239Q16600 458 aaKnown RBP15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 LNP1A1A4G5 178 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 H7BYZ3 331 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 DUS4LO95620 317 aaKnown RBP15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 DBX2Q6ZNG2 339 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 ASCL5Q7RTU5 278 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 ST6GAL2Q96JF0 529 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 SPSB2Q99619 263 aa15.69■□□□□ 0.1
CLSTN1-202ENST00000377298 ZNF727A8MUV8 499 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 PCOLCEQ15113 449 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 ETFRF1Q6IPR1 90 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 OR10Z1Q8NGY1 313 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 ZNF331Q9NQX6 463 aaPredicted RBP15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 MEX3AA1L020 520 aaKnown RBP15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 DEFA6Q01524 100 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 TGIF1Q15583 401 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 FHL5Q5TD97 284 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 ARID2Q68CP9 1835 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 UQCC1Q9NVA1 299 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 STARD10Q9Y365 291 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 AHCTF1Q8WYP5 2266 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 ZNF705GA8MUZ8 300 aaPredicted RBP15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 GEMIN2O14893 280 aaKnown RBP15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 CTSDP07339 412 aaPredicted RBP15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 FAHD2BQ6P2I3 314 aaPredicted RBP15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 MUC20Q8N307 709 aaPredicted RBP15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 GVQW1Q8N7I0 195 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 FAHD2AQ96GK7 314 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 ZNF665Q9H7R5 613 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 TET1Q8NFU7 2136 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 BCL3P20749 454 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 SSTP61278 116 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 PMP22Q01453 160 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 TLE1Q04724 770 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 OR2T6Q8NHC8 308 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 RPS4Y2Q8TD47 263 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 TMEM171Q8WVE6 324 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 GPR27Q9NS67 375 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 ZNF107Q9UII5 783 aaPredicted RBP15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 LTBP1Q14766 1721 aa15.68■□□□□ 0.1
CLSTN1-202ENST00000377298 SOCS1O15524 211 aa15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 CD1AP06126 327 aa15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 MRPS11P82912 194 aaKnown RBP15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 GABRA6Q16445 453 aa15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 ZXDCQ2QGD7 858 aaPredicted RBP15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 LINC00596Q86U02 117 aa15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 ZPLD1Q8TCW7 415 aa15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 MARVELD1Q9BSK0 173 aa15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 PATZ1Q9HBE1 687 aaKnown RBP15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 OR4S2Q8NH73 311 aa15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 VSTM2AQ8TAG5 236 aa15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 BARX1Q9HBU1 254 aaPredicted RBP15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 UBE2L5PA0A1B0GUS4 154 aa15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 IGF2P01344 180 aa15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 C14orf79Q96F83 325 aa15.67■□□□□ 0.1
CLSTN1-202ENST00000377298 DSPPQ9NZW4 1301 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 GOSR1O95249 250 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 CTSBP07858 339 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 RPS4Y1P22090 263 aaKnown RBP15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 TRAV8-7A0A075B6U6 113 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 C20orf202A1L168 122 aa15.66■□□□□ 0.1
CLSTN1-202ENST00000377298 CEBPEQ15744 281 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms