RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 CEBPDP49716 269 aaPredicted RBP11.14□□□□□ -0.63
VPS13A-204ENST00000376634 CAMPP49913 170 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 GLDNQ6ZMI3 551 aaPredicted RBP11.14□□□□□ -0.63
VPS13A-204ENST00000376634 ZNF426Q9BUY5 554 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.14□□□□□ -0.63
VPS13A-204ENST00000376634 OR4C46A6NHA9 309 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 UPK1AO00322 258 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 BRS3P32247 399 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 UBE2L3P68036 154 aaKnown RBP11.13□□□□□ -0.63
VPS13A-204ENST00000376634 SLC25A35Q3KQZ1 300 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 C5orf17Q8NAS9 161 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 RAB37Q96AX2 223 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 TMPRSS13Q9BYE2 586 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 WSB2Q9NYS7 404 aaPredicted RBP11.13□□□□□ -0.63
VPS13A-204ENST00000376634 NYNRINQ9P2P1 1898 aaKnown RBP11.13□□□□□ -0.63
VPS13A-204ENST00000376634 RPS4Y1P22090 263 aaKnown RBP11.13□□□□□ -0.63
VPS13A-204ENST00000376634 GFERP55789 205 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 KISS1Q15726 138 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 DTD1Q8TEA8 209 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 OR6C3Q9NZP0 311 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 TCFL5Q9UL49 500 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 TMEM131Q92545 1883 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 TMEM238LA0A1B0GVL6 79 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 A6NJY4 79 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 PAQR9Q6ZVX9 377 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 SRD5A3Q9H8P0 318 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 KLK11Q9UBX7 282 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 SLC17A2O00624 439 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 COX7A1P24310 79 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 PTGFRP43088 359 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 ZXDAP98168 799 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 ANAPC16Q96DE5 110 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 TNFRSF19Q9NS68 423 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 ANXA10Q9UJ72 324 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 AMMECR1LQ6DCA0 310 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 MTCH2Q9Y6C9 303 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 NGFP01138 241 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 SLC25A1P53007 311 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 C21orf62-AS1Q17RA5 79 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 C11orf91Q3C1V1 193 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 PLPPR2Q96GM1 343 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 GPR87Q9BY21 358 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 TBX19O60806 448 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 DLX1P56177 255 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 RIGQ13278 110 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 DMRTC1Q5HYR2 192 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 OR8A1Q8NGG7 326 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 PERPQ96FX8 193 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 TMEM191AQ9H0A3 160 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 ALG1L2C9J202 215 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 TMEM211Q6ICI0 200 aa11.13□□□□□ -0.63
VPS13A-204ENST00000376634 RASL12Q9NYN1 266 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 FRMPD3Q5JV73 1810 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 LILRA5A6NI73 299 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 MASP2O00187 686 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 NAA60Q9H7X0 242 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 GP1BAP07359 652 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 MEOX2P50222 304 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 FOXC1Q12948 553 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 RNF165Q6ZSG1 346 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 MED13Q9UHV7 2174 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 VWA8A3KMH1 1905 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 A0A0A6YYD5 115 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 C3orf80F5H4A9 247 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 TMPRSS2O15393 492 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 P01737 135 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 RASL11BQ9BPW5 248 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 BCL2L10Q9HD36 194 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 ISLRO14498 428 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 CD1BP29016 333 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 KIR2DL1P43626 348 aaPredicted RBP11.12□□□□□ -0.63
VPS13A-204ENST00000376634 KIR2DL2P43627 348 aaPredicted RBP11.12□□□□□ -0.63
VPS13A-204ENST00000376634 PPP2CBP62714 309 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 PAFAH1B2P68402 229 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 SP6Q3SY56 376 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 RSRP1Q9BUV0 290 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 RPS27P42677 84 aaKnown RBP11.12□□□□□ -0.63
VPS13A-204ENST00000376634 LPAR6P43657 344 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 LINC00303Q3SY05 128 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 SNX22Q96L94 193 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 OR2A5Q96R48 311 aa11.12□□□□□ -0.63
VPS13A-204ENST00000376634 PAPPAQ13219 1627 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 SNRPEP62304 92 aaKnown RBP11.11□□□□□ -0.63
VPS13A-204ENST00000376634 DHRS2Q13268 280 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 OR4D10Q8NGI6 311 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 NT5CQ8TCD5 201 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 MOGAT1Q96PD6 335 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 PLEKHB1Q9UF11 243 aaPredicted RBP11.11□□□□□ -0.63
VPS13A-204ENST00000376634 C11orf94C9JXX5 98 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 MGPP08493 103 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 NAT1P18440 290 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 MSL2Q9HCI7 577 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 C3orf85A0A1B0GTC6 90 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 TMEM218A2RU14 115 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 AP4M1O00189 453 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 MELTFP08582 738 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 TIAL1Q01085 375 aaKnown RBP eCLIP11.11□□□□□ -0.63
VPS13A-204ENST00000376634 C6orf201Q7Z4U5 140 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 PRRT4C9JH25 899 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 FAM27D1Q5T7N8 215 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms