RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 TOLLIPQ9H0E2 274 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 SH3BGRL3Q9H299 93 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 GCM1Q9NP62 436 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 OCIAD1Q9NX40 245 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 MIOXQ9UGB7 285 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 TMEM14DPA8MWL7 114 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 OR2T2Q6IF00 324 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 ADPRHL1Q8NDY3 354 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 IFI44Q8TCB0 444 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 ZNF501Q96CX3 271 aaPredicted RBP12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 PLPPR2Q96GM1 343 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 ZNF816-ZNF321PA0A0X1KG74 233 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 A0A1B0GTI1 187 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 CTSDP07339 412 aaPredicted RBP12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 IGFBP3P17936 291 aaPredicted RBP12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 HOXA1P49639 335 aaPredicted RBP12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 PMP22Q01453 160 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 TMEM267Q0VDI3 215 aaPredicted RBP12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 ASPHD2Q6ICH7 369 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 INTS12Q96CB8 462 aaKnown RBP12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 C5orf63A6NC05 138 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 LY86O95711 162 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 GSK3AP49840 483 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 FGF8P55075 233 aaPredicted RBP12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 MLF1P58340 268 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 RPL19P84098 196 aaKnown RBP12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 TRIM61Q5EBN2 209 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 ZNF787Q6DD87 383 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 C1orf87Q8N0U7 546 aa12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 TIMM8BQ9Y5J9 83 aaPredicted RBP12.95□□□□□ -0.34
UBQLN1-202ENST00000376395 CDH23Q9H251 3354 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 PIGBOS1A0A0B4J2F0 54 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 SOX15O60248 233 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 YIF1AO95070 293 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 SULT1A1P50225 295 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 FUT6P51993 359 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 SNAI3Q3KNW1 292 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 NANOS1Q8WY41 292 aaKnown RBP12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 GAR1Q9NY12 217 aaKnown RBP12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 RCC2Q9P258 522 aaKnown RBP12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 NKX2-6A6NCS4 301 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 CBR3O75828 277 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 HKR1P10072 659 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 ZXDAP98168 799 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 PLEKHF2Q9H8W4 249 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 NBASA2RRP1 2371 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 PI4KAP42356 2102 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 RIF1Q5UIP0 2472 aaKnown RBP12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 C3orf85A0A1B0GTC6 90 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 PDCD6O75340 191 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 PGA4P0DJD7 388 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 PGA3P0DJD8 388 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 BMP5P22003 454 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 OR4A4PQ8NGN8 299 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 CLDN16Q9Y5I7 305 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 AUP1Q9Y679 476 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 APC2O95996 2303 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 FER1L5A0AVI2 2057 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 PPP1CCP36873 323 aaKnown RBP12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 DSCR4P56555 118 aaPredicted RBP12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 MSMO1Q15800 293 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 VAX1Q5SQQ9 334 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 SLC25A45Q8N413 288 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 UFSP2Q9NUQ7 469 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 SLC2A8Q9NY64 477 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 TMED3Q9Y3Q3 217 aa12.94□□□□□ -0.34
UBQLN1-202ENST00000376395 H7BYZ3 331 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 MBPP02686 304 aaPredicted RBP12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 CCL4P13236 92 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 ZNF708P17019 499 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 RAB1AP62820 205 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 NAAAQ02083 359 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 EDDM3AQ14507 147 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 PDLIM3Q53GG5 364 aaPredicted RBP12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 DCAF12Q5T6F0 453 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 OR52M1Q8NGK5 317 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 OR10S1Q8NGN2 331 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 ZNF837Q96EG3 531 aaPredicted RBP12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 THOC3Q96J01 351 aaKnown RBP12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 ZNF407Q9C0G0 2248 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 A0A0A6YYD4 124 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 OR6C6A6NF89 314 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 TRAF3IP2O43734 574 aaPredicted RBP12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 GABRA2P47869 451 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 ZNF528Q3MIS6 628 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 OIT3Q8WWZ8 545 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 APH1AQ96BI3 265 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 SMIM7Q9BQ49 75 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 ERRFI1Q9UJM3 462 aaPredicted RBP12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 IGKV1D-8A0A087WSZ0 117 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 CCDC187A0A096LP49 1063 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 PHOX2AO14813 284 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 SCGB1D1O95968 90 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 IZUMO4Q1ZYL8 232 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 C15orf54Q8N8G6 183 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 OR2M3Q8NG83 312 aa12.93□□□□□ -0.34
UBQLN1-202ENST00000376395 A0A1W2PPQ1 181 aa12.92□□□□□ -0.34
UBQLN1-202ENST00000376395 METTL15P1P0C7V9 234 aa12.92□□□□□ -0.34
UBQLN1-202ENST00000376395 LIAT1Q6ZQX7 453 aa12.92□□□□□ -0.34
UBQLN1-202ENST00000376395 SLC35G3Q8N808 338 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms