RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 LPAR6P43657 344 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 IQCJQ1A5X6 159 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 ESRP2Q9H6T0 727 aaKnown RBP10.17□□□□□ -0.78
PTCH1-203ENST00000375274 C4orf51C9J302 202 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 ZNF737O75373 536 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 SRD5A2P31213 254 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 GALR1P47211 349 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 ERVFC1-1P60608 527 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 KRTDAPP60985 99 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 GUCA2BQ16661 112 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 ACER2Q5QJU3 275 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 TBC1D26Q86UD7 250 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 C9orf40Q8IXQ3 194 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 MARVELD3Q96A59 401 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 FAM173AQ9BQD7 235 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 SLC25A22Q9H936 323 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 GPR27Q9NS67 375 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 TRAPPC1Q9Y5R8 145 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 RGPD3A6NKT7 1758 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-203ENST00000375274 RGPD4Q7Z3J3 1758 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 ZNF318Q5VUA4 2279 aa10.17□□□□□ -0.78
PTCH1-203ENST00000375274 CHST1O43916 411 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 CDS2O95674 445 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 OPN1MWP04001 364 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 OPN1MW2P0DN77 364 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 OPN1MW3P0DN78 364 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 FSTP19883 344 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 DYNLT3P51808 116 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 RBPJQ06330 500 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 PUSL1Q8N0Z8 303 aaKnown RBP10.16□□□□□ -0.78
PTCH1-203ENST00000375274 PRO1933Q9H354 126 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 P4HTMQ9NXG6 502 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 STARD10Q9Y365 291 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 A0A1W2PQF6 199 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 KCNAB3O43448 404 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 HSBP1O75506 76 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 DXOO77932 396 aaKnown RBP10.16□□□□□ -0.78
PTCH1-203ENST00000375274 PAX6P26367 422 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 FGF8P55075 233 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-203ENST00000375274 H2BFSP57053 126 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 RGS7BPQ6MZT1 257 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-203ENST00000375274 UNQ9370/PRO34162Q6UXP9 181 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 HOGA1Q86XE5 327 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 MIOXQ9UGB7 285 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 ZDBF2Q9HCK1 2354 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 M0R1X1 148 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 SYNGR2O43760 224 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 SUMO1P63165 101 aaKnown RBP10.16□□□□□ -0.78
PTCH1-203ENST00000375274 ROM1Q03395 351 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 YBX2Q9Y2T7 364 aaKnown RBP10.16□□□□□ -0.78
PTCH1-203ENST00000375274 SIGLEC5O15389 551 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 CNIH1O95406 144 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 PNPP00491 289 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 IL2RAP01589 272 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 TPPP2P59282 170 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 SIGLEC14Q08ET2 396 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 ZADH2Q8N4Q0 377 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 CHST5Q9GZS9 411 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 OCIAD1Q9NX40 245 aa10.16□□□□□ -0.78
PTCH1-203ENST00000375274 XKRY2A2RUG3 117 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 CHEK1O14757 476 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 HPP00738 406 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 CCL2P13500 99 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 ZXDAP98168 799 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 BSXQ3C1V8 233 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 PRR27Q6MZM9 219 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 CXorf67Q86X51 503 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-203ENST00000375274 D2HGDHQ8N465 521 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 CLCF1Q9UBD9 225 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 FAM74A7A6NL05 159 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 OR5B21A6NL26 309 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 NGFRP08138 427 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 CT45A10P0DMU9 189 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 PNLIPP16233 465 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 CHRNA7P36544 502 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 EWSR1Q01844 656 aaKnown RBP eCLIP10.15□□□□□ -0.78
PTCH1-203ENST00000375274 FAM74A3Q4VXF1 159 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 NHLRC3Q5JS37 347 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 VAX1Q5SQQ9 334 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 TOMM20LQ6UXN7 152 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 NPDC1Q9NQX5 325 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-203ENST00000375274 PROCRQ9UNN8 238 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 MEX3AA1L020 520 aaKnown RBP10.15□□□□□ -0.78
PTCH1-203ENST00000375274 MFSD2BA6NFX1 497 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 C17orf78Q8N4C9 275 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 KLHDC1Q8N7A1 406 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 SCN2AQ99250 2005 aa10.15□□□□□ -0.78
PTCH1-203ENST00000375274 RCC1P18754 421 aaPredicted RBP10.15□□□□□ -0.79
PTCH1-203ENST00000375274 OR10G4Q8NGN3 311 aa10.15□□□□□ -0.79
PTCH1-203ENST00000375274 OR10G9Q8NGN4 311 aa10.15□□□□□ -0.79
PTCH1-203ENST00000375274 OR10G7Q8NGN6 311 aa10.15□□□□□ -0.79
PTCH1-203ENST00000375274 OR10X1Q8NGY0 326 aa10.15□□□□□ -0.79
PTCH1-203ENST00000375274 NRXN2Q9P2S2 1712 aa10.14□□□□□ -0.79
PTCH1-203ENST00000375274 A0A1W2PP11 408 aa10.14□□□□□ -0.79
PTCH1-203ENST00000375274 ADH4P08319 380 aa10.14□□□□□ -0.79
PTCH1-203ENST00000375274 CTRB1P17538 263 aa10.14□□□□□ -0.79
PTCH1-203ENST00000375274 CDC34P49427 236 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-203ENST00000375274 RANP62826 216 aaKnown RBP10.14□□□□□ -0.79
PTCH1-203ENST00000375274 HES1Q14469 280 aa10.14□□□□□ -0.79
PTCH1-203ENST00000375274 OR1C1Q15619 314 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms