RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 DUSP1P28562 367 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 ERP29P30040 261 aaKnown RBP11.22□□□□□ -0.61
PTCH1-202ENST00000375271 CDK5Q00535 292 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 ZNF91Q05481 1191 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 DOC2BQ14184 412 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 TRIM25Q14258 630 aaKnown RBP11.22□□□□□ -0.61
PTCH1-202ENST00000375271 HLA-DRB5Q30154 266 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 TMEM236Q5W0B7 351 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 HEPN1Q6WQI6 88 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 PLEKHG7Q6ZR37 379 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 CCDC54Q8NEL0 328 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 Q8NFD4 153 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 OR5M8Q8NGP6 311 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 CCDC124Q96CT7 223 aaKnown RBP11.22□□□□□ -0.61
PTCH1-202ENST00000375271 HRASLS5Q96KN8 279 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 ARL8BQ9NVJ2 186 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 ING3Q9NXR8 418 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 TAS2R3Q9NYW6 316 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 TRBV2A0A0J9YWF9 115 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 F8VVB4 439 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 F8VWA3 439 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 BUB1B-PAK6H3BSN5 160 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 LY86O95711 162 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 FAM107AO95990 144 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 ZNF44P15621 663 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 TMEM11P17152 192 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 HOXB6P17509 224 aaKnown RBP11.21□□□□□ -0.61
PTCH1-202ENST00000375271 RBP2P50120 134 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 ETV3LQ6ZN32 361 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 SLC35E3Q7Z769 313 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 ZNF695Q8IW36 515 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 OR52N4Q8NGI2 321 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 DNAJC9Q8WXX5 260 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 CHST5Q9GZS9 411 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 SLC25A19Q9HC21 320 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 PALMDQ9NP74 551 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 RBFOX1Q9NWB1 397 aaKnown RBP11.21□□□□□ -0.61
PTCH1-202ENST00000375271 GSTK1Q9Y2Q3 226 aa11.21□□□□□ -0.61
PTCH1-202ENST00000375271 A0A1B0GTI1 187 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 CCDC182A6NF36 153 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 PRR32B1ATL7 298 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 B2RBV5 119 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 PSPNO60542 156 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 MMP23AO75900 390 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 CALCBP10092 127 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 ZNF20P17024 532 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 ECI1P42126 302 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 OR3A1P47881 315 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 SCN1BQ07699 218 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 UBE2V2Q15819 145 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 C9orf66Q5T8R8 295 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 FAM220AQ7Z4H9 259 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 OR56B4Q8NH76 319 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 PP6455Q8WZ26 134 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 PRR25Q96S07 402 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 ASCL2Q99929 193 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 GON7Q9BXV9 100 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 ZNF286AQ9HBT8 521 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 NEK6Q9HC98 313 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 CLN6Q9NWW5 311 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 ARL2BPQ9Y2Y0 163 aa11.2□□□□□ -0.62
PTCH1-202ENST00000375271 CCL24O00175 119 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 MAGEB4O15481 346 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-202ENST00000375271 ENTPD6O75354 484 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 IGLV1-47P01700 117 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 SNRNP70P08621 437 aaKnown RBP11.19□□□□□ -0.62
PTCH1-202ENST00000375271 BCL3P20749 454 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 PRKACBP22694 351 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 ATP6V1E1P36543 226 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 MTCP1P56278 107 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 ZNF146Q15072 292 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 CXorf66Q5JRM2 361 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-202ENST00000375271 KRBOX4Q5JUW0 171 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 LHFPL2Q6ZUX7 228 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 MEPCEQ7L2J0 689 aaKnown RBP11.19□□□□□ -0.62
PTCH1-202ENST00000375271 OR8U1Q8NH10 309 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 OR9G1Q8NH87 305 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 C10orf35Q96D05 121 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 ASB9Q96DX5 294 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 NOL4LQ96MY1 436 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-202ENST00000375271 TBX5Q99593 518 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 SEBOXQ9HB31 216 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-202ENST00000375271 IL36RNQ9UBH0 155 aa11.19□□□□□ -0.62
PTCH1-202ENST00000375271 IGKV1-27A0A075B6S5 117 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 FGF16O43320 207 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 SRSF10O75494 262 aaKnown RBP11.18□□□□□ -0.62
PTCH1-202ENST00000375271 OR2H2O95918 312 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 AMY1AP04745 511 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 AMY2AP04746 511 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 UBCP0CG48 685 aaKnown RBP11.18□□□□□ -0.62
PTCH1-202ENST00000375271 CCL1P22362 96 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 CD34P28906 385 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 GLP1RP43220 463 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 LUMP51884 338 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-202ENST00000375271 CRISP1P54107 249 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 AESQ08117 197 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 HNF4GQ14541 408 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 TEX38Q6PEX7 206 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 BAIAP2L2Q6UXY1 529 aa11.18□□□□□ -0.62
PTCH1-202ENST00000375271 THNSL2Q86YJ6 484 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms