RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 CDX1P47902 265 aaPredicted RBP9.64□□□□□ -0.87
CCDC40-203ENST00000374877 NOVA1P51513 510 aaKnown RBP9.64□□□□□ -0.87
CCDC40-203ENST00000374877 DEFA6Q01524 100 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 IL13RA2Q14627 380 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 PPA1Q15181 289 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 TMEM176BQ3YBM2 270 aaPredicted RBP9.64□□□□□ -0.87
CCDC40-203ENST00000374877 SLC16A14Q7RTX9 510 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 C1QL4Q86Z23 238 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 LGI3Q8N145 548 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 PP6455Q8WZ26 134 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 RAB39BQ96DA2 213 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 MUCL1Q96DR8 90 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 Q96M66 194 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 NOSIPQ9Y314 301 aaKnown RBP9.64□□□□□ -0.87
CCDC40-203ENST00000374877 IGLV3-12A0A075B6K2 115 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 CCDC187A0A096LP49 1063 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 RBFOX3A6NFN3 312 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 IFITM10A6NMD0 228 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 B4E171 279 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 H0YL77 283 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 TSPAN7P41732 249 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 CSNK1A1P48729 337 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 EWSR1Q01844 656 aaKnown RBP eCLIP9.64□□□□□ -0.87
CCDC40-203ENST00000374877 SLC22A25Q6T423 547 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 MARS2Q96GW9 593 aaKnown RBP9.64□□□□□ -0.87
CCDC40-203ENST00000374877 SUCNR1Q9BXA5 334 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 SLC33A1O00400 549 aaPredicted RBP9.63□□□□□ -0.87
CCDC40-203ENST00000374877 TLX3O43711 291 aaPredicted RBP9.63□□□□□ -0.87
CCDC40-203ENST00000374877 SCRG1O75711 98 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 SLC34A2O95436 690 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 CYC1P08574 325 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 OR10D4PQ8NGN7 298 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 OXGR1Q96P68 337 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 COL25A1Q9BXS0 654 aaPredicted RBP9.63□□□□□ -0.87
CCDC40-203ENST00000374877 TREM2Q9NZC2 230 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 LIPGQ9Y5X9 500 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 CA11O75493 328 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 KLK3P07288 261 aaPredicted RBP9.63□□□□□ -0.87
CCDC40-203ENST00000374877 ATP6V0CP27449 155 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 NBL1P41271 181 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 OR10G3Q8NGC4 313 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 GALNT14Q96FL9 552 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 LRFN3Q9BTN0 628 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 METTL9Q9H1A3 318 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 DECR2Q9NUI1 292 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 TTC28Q96AY4 2481 aa9.63□□□□□ -0.87
CCDC40-203ENST00000374877 HEXBP07686 556 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 MSR1P21757 451 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 ZNF385CQ66K41 422 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-203ENST00000374877 OR2C3Q8N628 320 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 SLC35G3Q8N808 338 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 ZNF610Q8N9Z0 462 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 GJC3Q8NFK1 279 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 OR2AE1Q8NHA4 323 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 Q8WTZ3 238 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 S100PBPQ96BU1 408 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 SYT3Q9BQG1 590 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 OCIAD1Q9NX40 245 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 PLEK2Q9NYT0 353 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 ZNF318Q5VUA4 2279 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 WDR87Q6ZQQ6 2873 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 M0R135 149 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 CXCL1P09341 107 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 RND3P61587 244 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 PDCD1Q15116 288 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 P4HA3Q7Z4N8 544 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 PLPP5Q8NEB5 264 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 OR14L1PQ8NHC6 308 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 MSI2Q96DH6 328 aaKnown RBP9.62□□□□□ -0.87
CCDC40-203ENST00000374877 ZNF799Q96GE5 643 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 C18orf12Q96KH6 178 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 YPEL4Q96NS1 127 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 RBM24Q9BX46 236 aaKnown RBP9.62□□□□□ -0.87
CCDC40-203ENST00000374877 UNKLQ9H9P5 680 aaKnown RBP9.62□□□□□ -0.87
CCDC40-203ENST00000374877 V9GYS6 101 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 ATXN7O15265 892 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-203ENST00000374877 DLK1P80370 383 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 ZNF266Q14584 549 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 SPNS3Q6ZMD2 512 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 BOD1Q96IK1 185 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 RHOVQ96L33 236 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 STRADBQ9C0K7 418 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 MAGT1Q9H0U3 335 aa9.62□□□□□ -0.87
CCDC40-203ENST00000374877 TGIF2-C20orf24A0A0A6YYL0 155 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 A0A0U1RQV5 110 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 LMO1P25800 156 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 MAS1LP35410 378 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 GPX4P36969 197 aaPredicted RBP9.61□□□□□ -0.87
CCDC40-203ENST00000374877 HERV-K104P61576 105 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 KCNMB1Q16558 191 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 SNAI3Q3KNW1 292 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 NKAIN1Q4KMZ8 207 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 HIKESHIQ53FT3 197 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 ZNF429Q86V71 674 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 CYB561D1Q8N8Q1 229 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 SLC7A11Q9UPY5 501 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 CYB5BO43169 146 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 TIAF1O95411 115 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 ELOBQ15370 118 aa9.61□□□□□ -0.87
CCDC40-203ENST00000374877 PIGYQ3MUY2 71 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms