RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 A8MXK9 166 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 SIRPB1O00241 398 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 GPR31O00270 319 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 BPNT1O95861 308 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 F12P00748 615 aaPredicted RBP9.38□□□□□ -0.91
CXCL12-203ENST00000374429 CD46P15529 392 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 FABP9Q0Z7S8 132 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 CLN3Q13286 438 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 TMEM217Q8N7C4 229 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 OR2H1Q9GZK4 316 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 FAM234AQ9H0X4 552 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF71Q9NQZ8 489 aaPredicted RBP9.38□□□□□ -0.91
CXCL12-203ENST00000374429 PIEZO1Q92508 2521 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 A0A1W2PNV4 684 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 RBMXL2O75526 392 aaKnown RBP9.37□□□□□ -0.91
CXCL12-203ENST00000374429 NMBP08949 121 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 CNR1P21554 472 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 CPT2P23786 658 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 TRA2AQ13595 282 aaKnown RBP eCLIP9.37□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF528Q3MIS6 628 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 RGS7BPQ6MZT1 257 aaPredicted RBP9.37□□□□□ -0.91
CXCL12-203ENST00000374429 CLEC18BQ6UXF7 455 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 SLC36A1Q7Z2H8 476 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 TCTEX1D2Q8WW35 142 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 THRSPQ92748 146 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 PECRQ9BY49 303 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 RIMS4Q9H426 269 aaPredicted RBP9.37□□□□□ -0.91
CXCL12-203ENST00000374429 NUP210LQ5VU65 1888 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 MED12LQ86YW9 2145 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 LOC102723996A0A087X1L8 192 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 BTBD17A6NE02 478 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 PHF1O43189 567 aaPredicted RBP9.37□□□□□ -0.91
CXCL12-203ENST00000374429 SYNGR1O43759 233 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 SRSF10O75494 262 aaKnown RBP9.37□□□□□ -0.91
CXCL12-203ENST00000374429 NME2P22392 152 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 GNRHRP30968 328 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 ID4P47928 161 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 RAB32Q13637 225 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF766Q5HY98 468 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 FBXW12Q6X9E4 464 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 TMEM123Q8N131 208 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 TMEM229BQ8NBD8 167 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 NABP1Q96AH0 204 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 FAM173AQ9BQD7 235 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.37□□□□□ -0.91
CXCL12-203ENST00000374429 KCNS2Q9ULS6 477 aa9.37□□□□□ -0.91
CXCL12-203ENST00000374429 GIPP09681 153 aaPredicted RBP9.36□□□□□ -0.91
CXCL12-203ENST00000374429 ADH6P28332 368 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 PTGER4P35408 488 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 PIGPP57054 158 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 UBE2NP61088 152 aaKnown RBP9.36□□□□□ -0.91
CXCL12-203ENST00000374429 H3F3AP84243 136 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 PDZK1IP1Q13113 114 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 OR13G1Q8NGZ3 307 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 RFESDQ8TAC1 157 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 SLC25A21Q9BQT8 299 aaPredicted RBP9.36□□□□□ -0.91
CXCL12-203ENST00000374429 OBP2BQ9NPH6 170 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 NPDC1Q9NQX5 325 aaPredicted RBP9.36□□□□□ -0.91
CXCL12-203ENST00000374429 MED6O75586 246 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 HPP00738 406 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 IGHMP01871 453 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 ISG15P05161 165 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 GABRA1P14867 456 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF14P17017 642 aaPredicted RBP9.36□□□□□ -0.91
CXCL12-203ENST00000374429 BCL3P20749 454 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 APLNRP35414 380 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 CAV2P51636 162 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 HERV-K104P61576 105 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 AIMP2Q13155 320 aaKnown RBP9.36□□□□□ -0.91
CXCL12-203ENST00000374429 MSL2Q9HCI7 577 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 TREM1Q9NP99 234 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 FAM208BQ5VWN6 2430 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 SVEP1Q4LDE5 3571 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 AKR1C3P42330 323 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 MALLQ13021 153 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 MEF2DQ14814 521 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 PPA1Q15181 289 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 FDX2Q6P4F2 183 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF826PQ6ZT77 177 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 LYG2Q86SG7 212 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 CPNE4Q96A23 557 aaPredicted RBP9.36□□□□□ -0.91
CXCL12-203ENST00000374429 OR10C1Q96KK4 312 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 OPN3Q9H1Y3 402 aaPredicted RBP9.36□□□□□ -0.91
CXCL12-203ENST00000374429 C5orf66Q9H5L9 145 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 FN3KRPQ9HA64 309 aa9.36□□□□□ -0.91
CXCL12-203ENST00000374429 TRGV5A0A0B4J1U4 118 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 IGKV1-12A0A0C4DH73 117 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 SLC22A20A6NK97 555 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 G3V3Q6 166 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 IGKV1D-12P01611 117 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 ANKRD55Q3KP44 614 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 C1orf100Q5SVJ3 147 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 FAM27BQ5VT28 67 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 HSD17B11Q8NBQ5 300 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 ALX4Q9H161 411 aaPredicted RBP9.35□□□□□ -0.91
CXCL12-203ENST00000374429 OR5AC2Q9NZP5 309 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 A0A087WZY1 265 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 TUBAL3A6NHL2 446 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 MSGN1A6NI15 193 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF716A6NP11 495 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms